RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OLFML2AQ68BL7 652 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 OR10K2Q6IF99 312 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 FCGR1BQ92637 280 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 KIRREL1Q96J84 757 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 RAB9BQ9NP90 201 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 RNF114Q9Y508 228 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 MMP24Q9Y5R2 645 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 VGLL3A8MV65 326 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 CCRL2O00421 344 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 PDCD5O14737 125 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 BPNT1O95861 308 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 IGHV3-7P01780 117 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 MT-ND4P03905 459 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 GLAP06280 429 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 CGB3P0DN86 165 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 CGB7P0DN87 165 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 VSIG8P0DPA2 414 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 ARSBP15848 533 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 MYL9P24844 172 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 CD34P28906 385 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 SSTR5P35346 364 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 P2RY14Q15391 338 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 SSX1Q16384 188 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 LIAT1Q6ZQX7 453 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 OR10A7Q8NGE5 316 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 NDUFB11Q9NX14 153 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 RCC2Q9P258 522 aaKnown RBP11.49□□□□□ -0.57
VAMP4-203ENST00000474047 AMMECR1Q9Y4X0 333 aaPredicted RBP11.49□□□□□ -0.57
VAMP4-203ENST00000474047 SLC22A1O15245 554 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 SPINT2O43291 252 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 PDCD6O75340 191 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 CA11O75493 328 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 BRS3P32247 399 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 GNG10P50151 68 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 C6orf183Q5T699 404 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 SYT6Q5T7P8 510 aaPredicted RBP11.49□□□□□ -0.57
VAMP4-203ENST00000474047 Q6ZSV7 163 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 OR4K15Q8NH41 348 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 URM1Q9BTM9 101 aaKnown RBP11.49□□□□□ -0.57
VAMP4-203ENST00000474047 KCNIP1Q9NZI2 227 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 V9GY05 133 aa11.49□□□□□ -0.57
VAMP4-203ENST00000474047 A0A087X0M5 115 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 A0A1B0GX30 115 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 SDCBPO00560 298 aaPredicted RBP11.48□□□□□ -0.57
VAMP4-203ENST00000474047 SLC17A2O00624 439 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 ORC5O43913 435 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 RPS27AP62979 156 aaKnown RBP11.48□□□□□ -0.57
VAMP4-203ENST00000474047 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 LDLRAD2Q5SZI1 272 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 UBE2UQ5VVX9 321 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 ZNF773Q6PK81 442 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 PRR18Q8N4B5 295 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 DTX3Q8N9I9 347 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 MMP28Q9H239 520 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 LINC00574Q9H8X3 128 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 TCF19Q9Y242 345 aa11.48□□□□□ -0.57
VAMP4-203ENST00000474047 TRDV1A0A1B0GX56 115 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 J3QR06 171 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 IGLV1-47P01700 117 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 BLVRBP30043 206 aaPredicted RBP11.47□□□□□ -0.57
VAMP4-203ENST00000474047 MNDAP41218 407 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 DYNLT3P51808 116 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 SLC16A12Q6ZSM3 486 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 TMEM219Q86XT9 240 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 LINC01006Q8NI28 216 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 UBALD1Q8TB05 177 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 PIFOQ8TCI5 191 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 CAPSLQ8WWF8 208 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 RPEQ96AT9 228 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 KCNK15Q9H427 330 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 PLEKHJ1Q9NW61 149 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 PSG11Q9UQ72 335 aa11.47□□□□□ -0.57
VAMP4-203ENST00000474047 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 TSPAN9O75954 239 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 JUNBP17275 347 aaPredicted RBP11.46□□□□□ -0.57
VAMP4-203ENST00000474047 TPTE2P1Q5T6R2 138 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 HES5Q5TA89 166 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 SIGIRRQ6IA17 410 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 C22orf42Q6IC83 251 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 OR2W3Q7Z3T1 314 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 OR51D1Q8NGF3 324 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 TOMM40LQ969M1 308 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 GFI1Q99684 422 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 C16orf95Q9H693 158 aa11.46□□□□□ -0.57
VAMP4-203ENST00000474047 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
VAMP4-203ENST00000474047 TMEM14DPA8MWL7 114 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms