RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 RFESDQ8TAC1 157 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 NAA50Q9GZZ1 169 aaKnown RBP10.13□□□□□ -0.79
DDX56-209ENST00000473924 TMEM133Q9H2Q1 129 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 CHMP1AQ9HD42 196 aaPredicted RBP10.13□□□□□ -0.79
DDX56-209ENST00000473924 RAB9BQ9NP90 201 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
DDX56-209ENST00000473924 JMJD1CQ15652 2540 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 KIAA2026Q5HYC2 2103 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 IGHV2-26A0A0B4J1V2 119 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 FAM172BPA6NC97 362 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 TMEM127O75204 238 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 GABARAPO95166 117 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 FBP1P09467 338 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 CGB3P0DN86 165 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 CGB7P0DN87 165 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 SSTR5P35346 364 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
DDX56-209ENST00000473924 HILS1P60008 231 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 MRPS15P82914 257 aaKnown RBP10.12□□□□□ -0.79
DDX56-209ENST00000473924 BAMBIQ13145 260 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 TRAT1Q6PIZ9 186 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 SLC16A12Q6ZSM3 486 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 ABHD12Q8N2K0 398 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 OR10R2Q8NGX6 335 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 LGALS14Q8TCE9 139 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 PHF21AQ96BD5 680 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 RAB3CQ96E17 227 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 ARHGAP5-AS1Q96IT6 56 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 CYYR1Q96J86 154 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
DDX56-209ENST00000473924 CLEC7AQ9BXN2 247 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 PECRQ9BY49 303 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 KCNIP1Q9NZI2 227 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 HSF4Q9ULV5 492 aa10.12□□□□□ -0.79
DDX56-209ENST00000473924 ANK3Q12955 4377 aaKnown RBP10.12□□□□□ -0.79
DDX56-209ENST00000473924 A0A075B6Q4 140 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 FOXI3A8MTJ6 420 aaPredicted RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 TOR1AO14656 332 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 SPINT2O43291 252 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 ORC5O43913 435 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 VENTXO95231 258 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 GDNFP39905 211 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 TMEM50BP56557 158 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 SCAND1P57086 179 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 SRSF2Q01130 221 aaKnown RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 RTN4RL2Q86UN3 420 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 CLVS1Q8IUQ0 354 aaPredicted RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 GAPTQ8N292 157 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 PRR18Q8N4B5 295 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 OR11H6Q8NGC7 330 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 UBALD1Q8TB05 177 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 SETD6Q8TBK2 473 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 MRPL30Q8TCC3 161 aaKnown RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 SLC25A46Q96AG3 418 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 KIRREL1Q96J84 757 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
DDX56-209ENST00000473924 AK3Q9UIJ7 227 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 ETV7Q9Y603 341 aa10.11□□□□□ -0.79
DDX56-209ENST00000473924 C12orf77C9JDV5 145 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 NPIPB11E5RHQ5 1161 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 TRIM77I1YAP6 450 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 SDCBPO00560 298 aaPredicted RBP10.1□□□□□ -0.79
DDX56-209ENST00000473924 HOXA3O43365 443 aaPredicted RBP10.1□□□□□ -0.79
DDX56-209ENST00000473924 NOL3O60936 208 aaKnown RBP10.1□□□□□ -0.79
DDX56-209ENST00000473924 SCGNO76038 276 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 CD3GP09693 182 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 PRRX1P54821 245 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 CTF1Q16619 201 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 MOGAT2Q3SYC2 334 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 PLAC9Q5JTB6 97 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 ZNF626Q68DY1 528 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 Q6YL49 198 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 NDNFQ8TB73 568 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 ZNF596Q8TC21 504 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
DDX56-209ENST00000473924 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 TAF9BQ9HBM6 251 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 ZNF286AQ9HBT8 521 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 C12orf4Q9NQ89 552 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 TNFRSF19Q9NS68 423 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 RHBDL2Q9NX52 303 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 ABRACLQ9P1F3 81 aa10.1□□□□□ -0.79
DDX56-209ENST00000473924 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
DDX56-209ENST00000473924 BTBD17A6NE02 478 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 ODF3BA8MYP8 253 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 C15orf65H3BRN8 121 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 RAB27BO00194 218 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 NAPSAO96009 420 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 IGHV3-7P01780 117 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 HBZP02008 142 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 MELTFP08582 738 aa10.09□□□□□ -0.79
DDX56-209ENST00000473924 HIST1H1DP16402 221 aaKnown RBP10.09□□□□□ -0.79
DDX56-209ENST00000473924 GNB3P16520 340 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms