RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
USP40-212ENST00000473191 OR4F4Q96R69 305 aa13.23□□□□□ -0.29
USP40-212ENST00000473191 LINC00527Q9UJ94 153 aa13.23□□□□□ -0.29
USP40-212ENST00000473191 TCRBV4S1A1TA0A5B7 111 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 LINC01548A6NM66 108 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 SLC31A2O15432 143 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 MAS1P04201 325 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 MNDAP41218 407 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 C18orf65Q6ZTR6 163 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 AHSA2Q719I0 299 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 ZNF329Q86UD4 541 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 LYPD6Q86Y78 171 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 C5orf56Q8N8D9 126 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 AKR1E2Q96JD6 320 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 BANF2Q9H503 90 aa13.22□□□□□ -0.29
USP40-212ENST00000473191 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 IRGMA1A4Y4 181 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 OOSP1A8MZH6 123 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 GPX5O75715 221 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 IGKV1D-33P01593 117 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 IGKV1-33P01594 117 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 MT-ND4P03905 459 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 FAM106CPP0CH98 169 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 KCNJ3P48549 501 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 ARHGDIBP52566 201 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 LOXL3P58215 753 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 MADCAM1Q13477 382 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 HES1Q14469 280 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 CCDC144NLQ6NUI1 221 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 GLIPR1L1Q6UWM5 242 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 THNSL2Q86YJ6 484 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 TMEM104Q8NE00 496 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 FBLIM1Q8WUP2 373 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 ARL11Q969Q4 196 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.29
USP40-212ENST00000473191 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 MOB4Q9Y3A3 225 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 AMMECR1Q9Y4X0 333 aaPredicted RBP13.21□□□□□ -0.29
USP40-212ENST00000473191 HSPE1-MOB4S4R3N1 261 aa13.21□□□□□ -0.29
USP40-212ENST00000473191 SDCBPO00560 298 aaPredicted RBP13.2□□□□□ -0.3
USP40-212ENST00000473191 TMEM11P17152 192 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 FSTP19883 344 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 CAPGP40121 348 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 MPV17LQ2QL34 196 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 OGFRL1Q5TC84 451 aaPredicted RBP13.2□□□□□ -0.3
USP40-212ENST00000473191 FOXB2Q5VYV0 432 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 PACRGLQ8N7B6 248 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 SETD9Q8NE22 299 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 OR10X1Q8NGY0 326 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 OR4K15Q8NH41 348 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 NEK7Q8TDX7 302 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 SGCDQ92629 289 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 DERL3Q96Q80 235 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 S100A13Q99584 98 aa13.2□□□□□ -0.3
USP40-212ENST00000473191 RCC2Q9P258 522 aaKnown RBP13.2□□□□□ -0.3
USP40-212ENST00000473191 MRPS28Q9Y2Q9 187 aaKnown RBP13.2□□□□□ -0.3
USP40-212ENST00000473191 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 ZNF736B4DX44 427 aaPredicted RBP13.19□□□□□ -0.3
USP40-212ENST00000473191 H3BUI4 141 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 AIPO00170 330 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 HSD17B6O14756 317 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 PF4V1P10720 104 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 GTF2F2P13984 249 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 CELP19835 753 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 CD33P20138 364 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 ZNF134P52741 427 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 GP2P55259 537 aaKnown RBP13.19□□□□□ -0.3
USP40-212ENST00000473191 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 FAM27D1Q5T7N8 215 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 SIGIRRQ6IA17 410 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 OR10A7Q8NGE5 316 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
USP40-212ENST00000473191 GFOD1Q9NXC2 390 aa13.19□□□□□ -0.3
USP40-212ENST00000473191 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
USP40-212ENST00000473191 C12orf77C9JDV5 145 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 CCRL2O00421 344 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 RCC1P18754 421 aaPredicted RBP13.18□□□□□ -0.3
USP40-212ENST00000473191 GZMHP20718 246 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 RAB7AP51149 207 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 SYT6Q5T7P8 510 aaPredicted RBP13.18□□□□□ -0.3
USP40-212ENST00000473191 ETV3LQ6ZN32 361 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 LINC00596Q86U02 117 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 C8orf59Q8N0T1 100 aaPredicted RBP13.18□□□□□ -0.3
USP40-212ENST00000473191 PRR18Q8N4B5 295 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 NANOGP1Q8N7R0 232 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 OR4X2Q8NGF9 303 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 OR10V1Q8NGI7 309 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 OR1L1Q8NH94 360 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
USP40-212ENST00000473191 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
USP40-212ENST00000473191 PSMB11A5LHX3 300 aa13.17□□□□□ -0.3
USP40-212ENST00000473191 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms