RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PRRX1P54821 245 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 CLDN12P56749 244 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 ACTG1P63261 375 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 AANATQ16613 207 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 C17orf58Q2M2W7 97 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 TMEM30BQ3MIR4 351 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 SIGIRRQ6IA17 410 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 C16orf87Q6PH81 154 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 SLC16A12Q6ZSM3 486 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 FAM89BQ8N5H3 189 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 OR56B1Q8NGI3 324 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 OR5R1Q8NH85 324 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 MDFIQ99750 246 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 LPAR5Q9H1C0 372 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 MEGF9Q9H1U4 602 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 RIMS4Q9H426 269 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-211ENST00000472490 IDI2-AS1Q9NZ38 188 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 DOCK11Q5JSL3 2073 aa11.56□□□□□ -0.56
BRCA1-211ENST00000472490 CUBNO60494 3623 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 UBE2QL1A1L167 161 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 METTL21EPA6NDL7 271 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 NPIPB11E5RHQ5 1161 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 SPINT2O43291 252 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 AIREO43918 545 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 CRYBA1P05813 215 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 CGB3P0DN86 165 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 CGB7P0DN87 165 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 RAB6AP20340 208 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 NFYBP25208 207 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 HTR1DP28221 377 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 SDC2P34741 201 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 CEACAM3P40198 252 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 IER3P46695 156 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 ARHGDIBP52566 201 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
BRCA1-211ENST00000472490 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 GAPTQ8N292 157 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 PTX4Q96A99 478 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 DUX5Q96PT3 197 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 HSF4Q9ULV5 492 aa11.55□□□□□ -0.56
BRCA1-211ENST00000472490 MMP23AO75900 390 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 SSTR5P35346 364 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 SCAND1P57086 179 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 SFXN4Q6P4A7 337 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 Q6ZTK2 550 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 CROCCP3Q8IVE0 287 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 OR52M1Q8NGK5 317 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 OR4K15Q8NH41 348 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 OR9G1Q8NH87 305 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 CCDC107Q8WV48 283 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 DYRK2Q92630 601 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-211ENST00000472490 YIPF6Q96EC8 236 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 NICN1Q9BSH3 213 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 CENPOQ9BU64 300 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 MRPS26Q9BYN8 205 aaKnown RBP11.54□□□□□ -0.56
BRCA1-211ENST00000472490 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 DAPK2Q9UIK4 370 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-211ENST00000472490 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
BRCA1-211ENST00000472490 TMEM272A0A1B0GTI8 110 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 POM121CA8CG34 1229 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 LEUTXA8MZ59 168 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 LDLRAD4O15165 306 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 SCGNO76038 276 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 VEGFCP49767 419 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 MRPS15P82914 257 aaKnown RBP11.53□□□□□ -0.56
BRCA1-211ENST00000472490 MXD1Q05195 221 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 LRRC75BQ2VPJ9 315 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-211ENST00000472490 SPATA3Q8NHX4 192 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 RFESDQ8TAC1 157 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 SSX3Q99909 188 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 SULT4A1Q9BR01 284 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 CHMP1AQ9HD42 196 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-211ENST00000472490 ABCB10Q9NRK6 738 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
BRCA1-211ENST00000472490 DPM3Q9P2X0 92 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 MGAT4AQ9UM21 535 aa11.53□□□□□ -0.56
BRCA1-211ENST00000472490 JMJD1CQ15652 2540 aa11.52□□□□□ -0.56
BRCA1-211ENST00000472490 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 SMIM30A4D0T7 59 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 C15orf65H3BRN8 121 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 SDCBPO00560 298 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-211ENST00000472490 SOCS1O15524 211 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 IGLV1-47P01700 117 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 IGHV4-59P01825 116 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 SSX2Q16385 188 aa11.52□□□□□ -0.57
BRCA1-211ENST00000472490 LTC4SQ16873 150 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms