RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 FOXF2Q12947 444 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 FBXW12Q6X9E4 464 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.32
GCOM1-206ENST00000471563 Q6ZS92 163 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 LGI3Q8N145 548 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 SUMF2Q8NBJ7 301 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 OR52M1Q8NGK5 317 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.32
GCOM1-206ENST00000471563 MSI2Q96DH6 328 aaKnown RBP13.02□□□□□ -0.32
GCOM1-206ENST00000471563 RCL1Q9Y2P8 373 aaKnown RBP13.02□□□□□ -0.32
GCOM1-206ENST00000471563 OPRM1P35372 400 aa13.02□□□□□ -0.33
GCOM1-206ENST00000471563 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
GCOM1-206ENST00000471563 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.33
GCOM1-206ENST00000471563 SARAFQ96BY9 339 aa13.02□□□□□ -0.33
GCOM1-206ENST00000471563 SLC2A9Q9NRM0 540 aa13.02□□□□□ -0.33
GCOM1-206ENST00000471563 WASF3Q9UPY6 502 aa13.02□□□□□ -0.33
GCOM1-206ENST00000471563 IGKV1-27A0A075B6S5 117 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 MTCP1P56278 107 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 NHLH2Q02577 135 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 PHLDA2Q53GA4 152 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 NAXEQ8NCW5 288 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 OR5L1Q8NGL2 311 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 SPSB1Q96BD6 273 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 GP6Q9HCN6 339 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 CRIM1Q9NZV1 1036 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 FAM230AA0A1W2PPH8 454 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 LYZL6O75951 148 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 IGHV1-2P23083 117 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 FXYD4P59646 89 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 RSU1Q15404 277 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 GUSBP1Q15486 140 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 TAF9Q16594 264 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 SPACA3Q8IXA5 215 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 OR8G5Q8NG78 346 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 OR4D5Q8NGN0 318 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 MARS2Q96GW9 593 aaKnown RBP13.01□□□□□ -0.33
GCOM1-206ENST00000471563 POM121L2Q96KW2 1035 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 OR51B6Q9H340 312 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 GTF3C1Q12789 2109 aa13.01□□□□□ -0.33
GCOM1-206ENST00000471563 GATCO43716 136 aaKnown RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 KIR2DL2P43627 348 aaPredicted RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 RAB2AP61019 212 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 EWSR1Q01844 656 aaKnown RBP eCLIP13□□□□□ -0.33
GCOM1-206ENST00000471563 ACSF3Q4G176 576 aaPredicted RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 MDP1Q86V88 176 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 MYPOPQ86VE0 399 aaPredicted RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 MUCL1Q96DR8 90 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 BOD1Q96IK1 185 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 SYT3Q9BQG1 590 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 ZNF581Q9P0T4 197 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
GCOM1-206ENST00000471563 MED19A0JLT2 244 aaPredicted RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 SPRY1O43609 319 aaPredicted RBP13□□□□□ -0.33
GCOM1-206ENST00000471563 ANGPTL7O43827 346 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 ZNF205O95201 554 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 NRASP01111 189 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 HOXA5P20719 270 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 ARR3P36575 388 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 UCP3P55916 312 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 OR8B8Q15620 311 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 PIGCQ92535 297 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 SPSB4Q96A44 273 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 ABHD17AQ96GS6 310 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 RARRES2Q99969 163 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 GGACTQ9BVM4 153 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 TOLLIPQ9H0E2 274 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 C11orf1Q9H5F2 150 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 SPTBN4Q9H254 2564 aa13□□□□□ -0.33
GCOM1-206ENST00000471563 A0A1B0GV50 99 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 WRBO00258 174 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 CELA3BP08861 270 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 KIAA0141Q14154 515 aaPredicted RBP12.99□□□□□ -0.33
GCOM1-206ENST00000471563 GNMTQ14749 295 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 CCDC71LQ8N9Z2 235 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 BCL2L14Q9BZR8 327 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
GCOM1-206ENST00000471563 PRR14LQ5THK1 2151 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 RBFOX3A6NFN3 312 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 WNT5AP41221 380 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 RPRMLQ8N4K4 120 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
GCOM1-206ENST00000471563 TRBV23-1A0A0A0MS06 115 aa12.98□□□□□ -0.33
GCOM1-206ENST00000471563 BTBD17A6NE02 478 aa12.98□□□□□ -0.33
GCOM1-206ENST00000471563 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
GCOM1-206ENST00000471563 PITX3O75364 302 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms