RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 CLEC18BQ6UXF7 455 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 GSG1LQ6UXU4 331 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
SND1-208ENST00000470463 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 TOMM40LQ969M1 308 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 GALMQ96C23 342 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 GON7Q9BXV9 100 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 FAM234AQ9H0X4 552 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 GCM1Q9NP62 436 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 PAIP2BQ9ULR5 123 aaKnown RBP9.24□□□□□ -0.93
SND1-208ENST00000470463 OR2W1Q9Y3N9 320 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
SND1-208ENST00000470463 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 TRAV38-1A0A0B4J264 116 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 GPR31O00270 319 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 WNT9BO14905 357 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 BET1O15155 118 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 SPINT2O43291 252 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 HSPA12AO43301 675 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 GOSR1O95249 250 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 CLDN14O95500 239 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 IFNA21P01568 189 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 SCTP09683 121 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 PET100P0DJ07 73 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 PSG2P11465 335 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 COL10A1Q03692 680 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 MSMO1Q15800 293 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 TMEM30BQ3MIR4 351 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 ESCO2Q56NI9 601 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 IGSF11Q5DX21 431 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 KRBOX4Q5JUW0 171 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 C17orf107Q6ZR85 190 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
SND1-208ENST00000470463 LRTM2Q8N967 370 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 ASCC1Q8N9N2 400 aaKnown RBP9.23□□□□□ -0.93
SND1-208ENST00000470463 PLPPR1Q8TBJ4 325 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 RTN4IP1Q8WWV3 396 aaPredicted RBP9.23□□□□□ -0.93
SND1-208ENST00000470463 NINJ1Q92982 152 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 TMEM230Q96A57 120 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 AKR1E2Q96JD6 320 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 NMES1Q9C002 83 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 TOLLIPQ9H0E2 274 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 FXYD6Q9H0Q3 95 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 SLA2Q9H6Q3 261 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 NAA60Q9H7X0 242 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 SAP30LQ9HAJ7 183 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 ZFP57Q9NU63 452 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 OR6C3Q9NZP0 311 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 ESPL1Q14674 2120 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
SND1-208ENST00000470463 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 CLEC18AA5D8T8 446 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 NKX2-6A6NCS4 301 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 NKX6-3A6NJ46 265 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 E7EQL1 145 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 NDUFA2O43678 99 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 PSPNO60542 156 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 FSTL3O95633 263 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 WNT2P09544 360 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 AADACP22760 399 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 GABRA2P47869 451 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 OR3A1P47881 315 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 LUMP51884 338 aaPredicted RBP9.22□□□□□ -0.93
SND1-208ENST00000470463 H2BFSP57053 126 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 FXYD4P59646 89 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 SNRPD2P62316 118 aaKnown RBP9.22□□□□□ -0.93
SND1-208ENST00000470463 BAMBIQ13145 260 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 ATXN7L3Q14CW9 347 aaPredicted RBP9.22□□□□□ -0.93
SND1-208ENST00000470463 IGFBP7Q16270 282 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 CR1LQ2VPA4 569 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 DMRTC2Q8IXT2 367 aaPredicted RBP9.22□□□□□ -0.93
SND1-208ENST00000470463 LGI3Q8N145 548 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 CLEC18CQ8NCF0 446 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 ZBTB34Q8NCN2 500 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 SDSLQ96GA7 329 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 CHIAQ9BZP6 476 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 ZNF665Q9H7R5 613 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 TAF9BQ9HBM6 251 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 SLC2A9Q9NRM0 540 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 CISD1Q9NZ45 108 aaKnown RBP9.22□□□□□ -0.93
SND1-208ENST00000470463 PIPOXQ9P0Z9 390 aa9.22□□□□□ -0.93
SND1-208ENST00000470463 IGKV1D-17A0A075B6S4 117 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 IGHV3-64DA0A0J9YX35 117 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 C5orf51A6NDU8 294 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 RNF212BA8MTL3 300 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.94
SND1-208ENST00000470463 K7N7A8 449 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 ZNF737O75373 536 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 HEXAP06865 529 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 RPS2P15880 293 aaKnown RBP9.21□□□□□ -0.94
SND1-208ENST00000470463 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.94
SND1-208ENST00000470463 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
SND1-208ENST00000470463 IL2RGP31785 369 aa9.21□□□□□ -0.94
SND1-208ENST00000470463 PPOXP50336 477 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms