RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 PRB2P02812 416 aaPredicted RBP12.94□□□□□ -0.34
COL9A3-208ENST00000469802 GTF2F2P13984 249 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 GNG10P50151 68 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
COL9A3-208ENST00000469802 ST3GAL4Q11206 333 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 MED21Q13503 144 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 DOC2BQ14184 412 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 LTC4SQ16873 150 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
COL9A3-208ENST00000469802 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 DHRSXQ8N5I4 330 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 C5orf56Q8N8D9 126 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 C8orf31Q8N9H6 132 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 OR52M1Q8NGK5 317 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 OR14A2Q96R54 314 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
COL9A3-208ENST00000469802 CKLFQ9UBR5 152 aa12.94□□□□□ -0.34
COL9A3-208ENST00000469802 HSD17B6O14756 317 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 ORC5O43913 435 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 GNAO1P09471 354 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 GZMHP20718 246 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 LOXL3P58215 753 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 TAS2R43P59537 309 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 RCN1Q15293 331 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 S100A13Q99584 98 aa12.93□□□□□ -0.34
COL9A3-208ENST00000469802 CHCHD3Q9NX63 227 aaKnown RBP12.93□□□□□ -0.34
COL9A3-208ENST00000469802 A0A1W2PPE3 182 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 FGF16O43320 207 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 PF4V1P10720 104 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 TMEM11P17152 192 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 CAPGP40121 348 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 EBI3Q14213 229 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 GPR176Q14439 515 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 ATAD3CQ5T2N8 411 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 CDH26Q8IXH8 852 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 GAPTQ8N292 157 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 MUL1Q969V5 352 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
COL9A3-208ENST00000469802 DERL3Q96Q80 235 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 SPACA1Q9HBV2 294 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 NECAP2Q9NVZ3 263 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 GFOD1Q9NXC2 390 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
COL9A3-208ENST00000469802 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
COL9A3-208ENST00000469802 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-208ENST00000469802 PIN1P1O15428 100 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 IGKV1D-33P01593 117 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 IGKV1-33P01594 117 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 MT-ND4P03905 459 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 CD1AP06126 327 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 Q3ZCU0 254 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 OGFRL1Q5TC84 451 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-208ENST00000469802 C8orf59Q8N0T1 100 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-208ENST00000469802 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 Q8N6K4 173 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 ARL11Q969Q4 196 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 FKBP14Q9NWM8 211 aa12.91□□□□□ -0.34
COL9A3-208ENST00000469802 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-208ENST00000469802 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 AIPO00170 330 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 SDCBPO00560 298 aaPredicted RBP12.9□□□□□ -0.34
COL9A3-208ENST00000469802 CD33P20138 364 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 WNT4P56705 351 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 HES1Q14469 280 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 FAM53AQ6NSI3 398 aaPredicted RBP12.9□□□□□ -0.34
COL9A3-208ENST00000469802 GLIPR1L1Q6UWM5 242 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 ZNF439Q8NDP4 499 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 TMEM104Q8NE00 496 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 UBALD1Q8TB05 177 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 NEK7Q8TDX7 302 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 CCDC107Q8WV48 283 aa12.9□□□□□ -0.34
COL9A3-208ENST00000469802 PNMA8CA0A1B0GUJ8 204 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 CCRL2O00421 344 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 MYL12BO14950 172 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 SC5DO75845 299 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 IGHG2P01859 326 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 IGLL1P15814 213 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 CELP19835 753 aa12.89□□□□□ -0.35
COL9A3-208ENST00000469802 ZNF137PP52743 207 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms