RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ALPLP05186 524 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 FCGR1AP12314 374 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 GABRB1P18505 474 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 RAB3AP20336 220 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 ZNF816Q0VGE8 651 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-204ENST00000469207 GPR50Q13585 617 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 IL13RA2Q14627 380 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 KIR2DS1Q14954 304 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 XAF1Q6GPH4 301 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 Q8NFD4 153 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 ARL11Q969Q4 196 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 ERVK13-1Q9NX77 482 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 RYR2Q92736 4967 aa9.6□□□□□ -0.87
HDAC3-204ENST00000469207 AP4M1O00189 453 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 SDCBPO00560 298 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-204ENST00000469207 EI24O14681 340 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 RAMP3O60896 148 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 OR7C1O76099 320 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-204ENST00000469207 ZNF134P52741 427 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 ATAD3CQ5T2N8 411 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 MEDAGQ5VYS4 303 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 ZNF529Q6P280 563 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 TGIF2LXQ8IUE1 241 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 OR2T10Q8NGZ9 312 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 ST6GALNAC6Q969X2 333 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 S1PR3Q99500 378 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 FAM118AQ9NWS6 357 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 GAR1Q9NY12 217 aaKnown RBP9.59□□□□□ -0.87
HDAC3-204ENST00000469207 SACSQ9NZJ4 4579 aa9.59□□□□□ -0.87
HDAC3-204ENST00000469207 DNAH7Q8WXX0 4024 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 TMEM212A6NML5 194 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 MPZL2O60487 215 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 RPSAP08865 295 aaKnown RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 GZMHP20718 246 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SERPINA2P20848 420 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SLC6A1P30531 599 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 VHLP40337 213 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 CDX1P47902 265 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 CFHR3Q02985 330 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF260Q3ZCT1 412 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 CXorf66Q5JRM2 361 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 C9orf66Q5T8R8 295 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SLC16A12Q6ZSM3 486 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SYS1Q8N2H4 156 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 OR10A7Q8NGE5 316 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 OR52I1Q8NGK6 324 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 OR5M8Q8NGP6 311 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 OR8U1Q8NH10 309 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 OR52N1Q8NH53 320 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 RTN4IP1Q8WWV3 396 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 RITA1Q96K30 269 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 RASL11BQ9BPW5 248 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 JAM3Q9BX67 310 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 KLK15Q9H2R5 256 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 LIN7CQ9NUP9 197 aaKnown RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 GFOD1Q9NXC2 390 aa9.58□□□□□ -0.88
HDAC3-204ENST00000469207 SIRT4Q9Y6E7 314 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-204ENST00000469207 H3BNX3 289 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 MAGEB3O15480 346 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 MOSP00540 346 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 MT-ND4P03905 459 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 SLC2A2P11168 524 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-204ENST00000469207 GBX2P52951 348 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-204ENST00000469207 PAX5Q02548 391 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 KIAA0141Q14154 515 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-204ENST00000469207 IZUMO1Q8IYV9 350 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 LINC00311Q8N616 119 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 OR10V1Q8NGI7 309 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 OR13C5Q8NGS8 318 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 RHOXF1Q8NHV9 184 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 METTL9Q9H1A3 318 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 GNB4Q9HAV0 340 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 GMPPBQ9Y5P6 360 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
HDAC3-204ENST00000469207 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 MAGEA13PA6NCF6 341 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 G3V318 75 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ELANEP08246 267 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 LIMS3P0CW19 117 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 LIMS4P0CW20 117 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 CNTFRP26992 372 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 CD1BP29016 333 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF93P35789 620 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-204ENST00000469207 KCNJ3P48549 501 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ALDH3A2P51648 485 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 RBM11P57052 281 aaKnown RBP9.56□□□□□ -0.88
HDAC3-204ENST00000469207 FOXE3Q13461 319 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
HDAC3-204ENST00000469207 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 DDI2Q5TDH0 399 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ASPHD1Q5U4P2 390 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 PRR18Q8N4B5 295 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms