RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 MOGAT3Q86VF5 341 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 CMTM1Q8IZ96 169 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 OR11H4Q8NGC9 324 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 THAP6Q8TBB0 222 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 Q8TCH9 128 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 ITLN1Q8WWA0 313 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
SMC1A-205ENST00000469129 SLC5A7Q9GZV3 580 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 METTL8Q9H825 291 aaKnown RBP7.87□□□□□ -1.15
SMC1A-205ENST00000469129 RAB9BQ9NP90 201 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 RNF7Q9UBF6 113 aa7.87□□□□□ -1.15
SMC1A-205ENST00000469129 BOD1L1Q8NFC6 3051 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 IGHV3-64DA0A0J9YX35 117 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 DUXBA0A1W2PPF3 345 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 LRRC30A6NM36 301 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 B8ZZF3 427 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 WNT9BO14905 357 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 ARPC5O15511 151 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 HSPA12AO43301 675 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 OR4A8P0C604 315 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 SERPINF1P36955 418 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 OR3A1P47881 315 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 SNRPD2P62316 118 aaKnown RBP7.86□□□□□ -1.15
SMC1A-205ENST00000469129 COL10A1Q03692 680 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 ZNF345Q14585 488 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 HERPUD1Q15011 391 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 ADIPOQQ15848 244 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 ANKRD55Q3KP44 614 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 BEX5Q5H9J7 111 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 FAM209AQ5JX71 171 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 H1FOOQ8IZA3 346 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-205ENST00000469129 LGI3Q8N145 548 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 LRTM2Q8N967 370 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 FAM216AQ8WUB2 273 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 SECTM1Q8WVN6 248 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 NINJ1Q92982 152 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 SNX22Q96L94 193 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 C2orf50Q96LR7 162 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 WFIKKN1Q96NZ8 548 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 EGLN1Q9GZT9 426 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 LIME1Q9H400 295 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 ZFP57Q9NU63 452 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 OR2W1Q9Y3N9 320 aa7.86□□□□□ -1.15
SMC1A-205ENST00000469129 TLN1Q9Y490 2541 aaKnown RBP7.86□□□□□ -1.15
SMC1A-205ENST00000469129 RP1L1Q8IWN7 2480 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 A0A0D9SG52 128 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 C13orf42A0A1B0GVH6 325 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 NKX6-3A6NJ46 265 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 C17orf100A8MU93 164 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 MGST3O14880 152 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PSPNO60542 156 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 TSC22D2O75157 780 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 RP2O75695 350 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 IFNA7P01567 189 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 WNT2P09544 360 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 EGR1P18146 543 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 RCC1P18754 421 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 S100A11P31949 105 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 NUP62P37198 522 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 GABRA2P47869 451 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 CEBPDP49716 269 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 LUMP51884 338 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 TLE1Q04724 770 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 TMEM187Q14656 261 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 MSMO1Q15800 293 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 LGALSLQ3ZCW2 172 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PHLDA2Q53GA4 152 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 ESCO2Q56NI9 601 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 KRBOX4Q5JUW0 171 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 C11orf87Q6NUJ2 197 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 ADAM5Q6NVV9 412 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 TMEM65Q6PI78 240 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 LIAT1Q6ZQX7 453 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 C22orf34Q6ZV56 151 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 C1orf87Q8N0U7 546 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 GCSAMQ8N6F7 178 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 LILRB4Q8NHJ6 448 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 CA5BP1Q8WTZ4 195 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 FAM222BQ8WU58 562 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PPP1R1CQ8WVI7 109 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 IL1F10Q8WWZ1 152 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PLPPR2Q96GM1 343 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 AKR1E2Q96JD6 320 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 LURAP1Q96LR2 239 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 NCOR1P1Q9H4R4 102 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 TAF9BQ9HBM6 251 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 DYNLRB1Q9NP97 96 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 KCNJ16Q9NPI9 418 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 RNF115Q9Y4L5 304 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 SPTA1P02549 2419 aa7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
SMC1A-205ENST00000469129 PLCE1Q9P212 2302 aa7.84□□□□□ -1.15
SMC1A-205ENST00000469129 TRAV14DV4A0A0A6YYC5 116 aa7.84□□□□□ -1.15
SMC1A-205ENST00000469129 IGKV1-6A0A0C4DH72 117 aa7.84□□□□□ -1.15
SMC1A-205ENST00000469129 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
SMC1A-205ENST00000469129 RNF212BA8MTL3 300 aa7.84□□□□□ -1.15
SMC1A-205ENST00000469129 H0Y980 276 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms