RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SHARPINQ9H0F6 387 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 RPUSD1Q9UJJ7 312 aaKnown RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 UBE2J1Q9Y385 318 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 MTORP42345 2549 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 FLNAP21333 2647 aaKnown RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MAP1AP78559 2803 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 TRAV20A0A0B4J274 112 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MEX3AA1L020 520 aaKnown RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF729A6NN14 1252 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 A8MXK9 166 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 HSPA12AO43301 675 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 RBBP9O75884 186 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MT-ND4P03905 459 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MSMBP08118 114 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MELTFP08582 738 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 CSF1P09603 554 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 PTHLHP12272 177 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 IL2RGP31785 369 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 ETV6P41212 452 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 OR3A3P47888 321 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 TAS2R46P59540 309 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 HLA-DRB3P79483 266 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 PAX5Q02548 391 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 CHRFAM7AQ494W8 412 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 METTL11BQ5VVY1 283 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 DCAF12L2Q5VW00 463 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 OLFML2AQ68BL7 652 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF841Q6ZN19 808 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 RTN4RL2Q86UN3 420 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 FGFRL1Q8N441 504 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 GDPD1Q8N9F7 314 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MAPK1IP1LQ8NDC0 245 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
HDAC6-216ENST00000468949 SMIM4Q8WVI0 70 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 IL1F10Q8WWZ1 152 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 TAS2R8Q9NYW2 309 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 TAS2R3Q9NYW6 316 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 V9GYH0 126 aa6.72□□□□□ -1.33
HDAC6-216ENST00000468949 C2CD3Q4AC94 2353 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TRBV6-6A0A0A6YYG2 114 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 C22orf46C9J442 243 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 FAM157AC9JC47 383 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 CTDSPLO15194 276 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 NAPSAO96009 420 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 HLA-DQB1P01920 261 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 FCER2P06734 321 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF728P0DKX0 622 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 GZMHP20718 246 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 GATA3P23771 443 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 SSTR5P35346 364 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 FAUP35544 74 aaKnown RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ERVFRD-1P60508 538 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 DGCR2P98153 550 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 SSBP1Q04837 148 aaKnown RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF273Q14593 569 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 LTC4SQ16873 150 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TMEM249Q2WGJ8 235 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TMEM30BQ3MIR4 351 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ACTBL2Q562R1 376 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF57Q68EA5 555 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 CYB5R2Q6BCY4 276 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 CLEC9AQ6UXN8 241 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF554Q86TJ5 538 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TOMM5Q8N4H5 51 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 KIR3DL3Q8N743 410 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 BEST4Q8NFU0 473 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 OR13A1Q8NGR1 328 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 OR5H2Q8NGV7 314 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 OR52I2Q8NH67 350 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 MAFIPQ8WZ33 124 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ARL11Q969Q4 196 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 GALMQ96C23 342 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ABHD1Q96SE0 405 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 GINS4Q9BRT9 223 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 CCDC32Q9BV29 185 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 NCOR1P1Q9H4R4 102 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 Q9N2K0 584 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 AKIP1Q9NQ31 210 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 GNG12Q9UBI6 72 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 OPN4Q9UHM6 478 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF230Q9UIE0 474 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ELF5Q9UKW6 265 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-216ENST00000468949 KCNK7Q9Y2U2 307 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ACANP16112 2415 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 ARID1AO14497 2285 aa6.71□□□□□ -1.34
HDAC6-216ENST00000468949 TRAV39A0A0B4J263 110 aa6.7□□□□□ -1.34
HDAC6-216ENST00000468949 KBTBD11-OT1A0A1B0GTJ5 212 aa6.7□□□□□ -1.34
HDAC6-216ENST00000468949 MEIOCA2RUB1 952 aa6.7□□□□□ -1.34
HDAC6-216ENST00000468949 KIAA1324LA8MWY0 1029 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-216ENST00000468949 ZNF736B4DX44 427 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-216ENST00000468949 M0R1W7 72 aa6.7□□□□□ -1.34
HDAC6-216ENST00000468949 SDCBPO00560 298 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-216ENST00000468949 BET1O15155 118 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms