RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 VSIG10L2P0DP72 767 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 RPS2P15880 293 aaKnown RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 AESQ08117 197 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 ETV3LQ6ZN32 361 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 LYZL2Q7Z4W2 148 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 CXorf58Q96LI9 332 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 MED12Q93074 2177 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 RNASEK-C17orf49H0YIS7 233 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 GFRA3O60609 400 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 PRDX2P32119 198 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 CD200P41217 278 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 NUBP1P53384 320 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 ATP6V1FQ16864 119 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 NRN1LQ496H8 165 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 SMIM7Q9BQ49 75 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 MRPL13Q9BYD1 178 aaKnown RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-203ENST00000467558 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 WIPI2Q9Y4P8 454 aa11.93□□□□□ -0.5
BRAT1-203ENST00000467558 TNFSF10P50591 281 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 UBE2G1P62253 170 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
BRAT1-203ENST00000467558 GUK1Q16774 197 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 HSD17B10Q99714 261 aaKnown RBP11.92□□□□□ -0.5
BRAT1-203ENST00000467558 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 CACNA1GO43497 2377 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 OR2C1O95371 312 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 TIGITQ495A1 244 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 Q6ZT83 130 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 A0A0G2JMM0 328 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 A0A1W2PPB8 328 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 A0A1W2PRS3 328 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 KIR3DP1A8MWS1 328 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 CDX4O14627 284 aaPredicted RBP11.92□□□□□ -0.5
BRAT1-203ENST00000467558 CHST1O43916 411 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 SLC25A4P12235 298 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 ZNF708P17019 499 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 F2RP25116 425 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 ARL3P36405 182 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 CEACAM3P40198 252 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 EFNB1P98172 346 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 OR8G5Q8NG78 346 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 SAT2Q96F10 170 aaPredicted RBP11.92□□□□□ -0.5
BRAT1-203ENST00000467558 DIRC2Q96SL1 478 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 Q9N2K0 584 aa11.92□□□□□ -0.5
BRAT1-203ENST00000467558 A0A0G2JK05 382 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 TRIM77I1YAP6 450 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 MGST3O14880 152 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
BRAT1-203ENST00000467558 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 OR5H1A6NKK0 313 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 CD59P13987 128 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 Q96M66 194 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 MESP1Q9BRJ9 268 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
BRAT1-203ENST00000467558 TANC1Q9C0D5 1861 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 C19orf57Q0VDD7 668 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 PPP5D1E7EU14 171 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 ZNHIT1O43257 154 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 SYNGR1O43759 233 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 CSRP1P21291 193 aaKnown RBP11.91□□□□□ -0.5
BRAT1-203ENST00000467558 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
BRAT1-203ENST00000467558 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
BRAT1-203ENST00000467558 A0A1B0GU03 582 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 COX7A1P24310 79 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 MST1P26927 711 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 CCL8P80075 99 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 MRGPRFQ96AM1 343 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 NKX2-6A6NCS4 301 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 COX7A2P2O60397 106 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-203ENST00000467558 KLF14Q8TD94 323 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-203ENST00000467558 GPR137Q96N19 417 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 SDHCQ99643 169 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-203ENST00000467558 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 OR10J4P0C629 311 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 CSN1S1P47710 185 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 ADAMTS17Q8TE56 1095 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 OR2V2Q96R30 315 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 TMEM147Q9BVK8 224 aa11.9□□□□□ -0.5
BRAT1-203ENST00000467558 OSGIN2Q9Y236 505 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms