RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 TRBV6-7A0A0A0MS04 114 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 OR5H14A6NHG9 310 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 C12orf77C9JDV5 145 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 C15orf65H3BRN8 121 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 ARPC1BO15143 372 aaKnown RBP10.78□□□□□ -0.68
COL4A1-202ENST00000467182 TMPRSS2O15393 492 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 ADAM20O43506 726 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 NDUFA2O43678 99 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 IFNA6P05013 189 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 RAG2P55895 527 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 SCGB2B2Q4G0G5 96 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 ZNF841Q6ZN19 808 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 OR5D13Q8NGL4 314 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 TERB2Q8NHR7 220 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 LURAP1Q96LR2 239 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 SLC25A21Q9BQT8 299 aaPredicted RBP10.78□□□□□ -0.68
COL4A1-202ENST00000467182 FXYD6Q9H0Q3 95 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 TAF9BQ9HBM6 251 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 ZNF221Q9UK13 617 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 LRRK2Q5S007 2527 aa10.78□□□□□ -0.68
COL4A1-202ENST00000467182 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 TUSC2O75896 110 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 VSIG10L2P0DP72 767 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 RAB25P57735 213 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 KCNJ8Q15842 424 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 SLC36A1Q7Z2H8 476 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 PEG10Q86TG7 708 aaKnown RBP10.77□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF554Q86TJ5 538 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 LDLRAD3Q86YD5 345 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 CADM3Q8N126 398 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 OR1L1Q8NH94 360 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 UBALD1Q8TB05 177 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 MRGPRDQ8TDS7 321 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 NRGNQ92686 78 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 KIRREL1Q96J84 757 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF2Q9BSG1 426 aaPredicted RBP10.77□□□□□ -0.69
COL4A1-202ENST00000467182 TMPRSS13Q9BYE2 586 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 SLC25A10Q9UBX3 287 aaPredicted RBP10.77□□□□□ -0.69
COL4A1-202ENST00000467182 GPR132Q9UNW8 380 aa10.77□□□□□ -0.69
COL4A1-202ENST00000467182 FUOMA2VDF0 154 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 F5H0A9 414 aaPredicted RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 DVL1O14640 695 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 DIRAS3O95661 229 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 CTXN2P0C2S0 81 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 PAX1P15863 534 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 AADACP22760 399 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 NFYAP23511 347 aaPredicted RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 FCGR2CP31995 323 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 SSTR5P35346 364 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 NPY4RP50391 375 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 EDDM3BP56851 147 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 TMEM33P57088 247 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 KRTAP10-9P60411 292 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 SEC61A1P61619 476 aaKnown RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 TSPAN5P62079 268 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 TATDN3Q17R31 274 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 TMEM17Q86X19 198 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 H1FOOQ8IZA3 346 aaPredicted RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 MUC20Q8N307 709 aaPredicted RBP10.76□□□□□ -0.69
COL4A1-202ENST00000467182 ZDHHC22Q8N966 263 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 OR6F1Q8NGZ6 308 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 MARCH1Q8TCQ1 289 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 CORO2AQ92828 525 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 RAB1CQ92928 201 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 TOLLIPQ9H0E2 274 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 C19orf12Q9NSK7 152 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 OR1A1Q9P1Q5 309 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 PCDHB10Q9UN67 800 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 ALG5Q9Y673 324 aa10.76□□□□□ -0.69
COL4A1-202ENST00000467182 NBPF19A0A087WUL8 3843 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 MEX3AA1L020 520 aaKnown RBP10.75□□□□□ -0.69
COL4A1-202ENST00000467182 C7orf66A4D0T2 115 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 BET1O15155 118 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 NDUFB3O43676 98 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 PEX14O75381 377 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 HBZP02008 142 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 HEXAP06865 529 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 WNT2P09544 360 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 NDUFB7P17568 137 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 FPR2P25090 351 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 GLP1RP43220 463 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 BCAP31P51572 246 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 FAM53AQ6NSI3 398 aaPredicted RBP10.75□□□□□ -0.69
COL4A1-202ENST00000467182 TRAT1Q6PIZ9 186 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 MOB3AQ96BX8 217 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 RTBDNQ9BSG5 229 aaPredicted RBP10.75□□□□□ -0.69
COL4A1-202ENST00000467182 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
COL4A1-202ENST00000467182 GHITMQ9H3K2 345 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 C5orf66Q9H5L9 145 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 KCNIP1Q9NZI2 227 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 OPN4Q9UHM6 478 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms