RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 BEX4Q9NWD9 120 aaPredicted RBP8.54□□□□□ -1.04
PMF1-204ENST00000466489 LAMP3Q9UQV4 416 aa8.54□□□□□ -1.04
PMF1-204ENST00000466489 RHBDD3Q9Y3P4 386 aa8.54□□□□□ -1.04
PMF1-204ENST00000466489 DCHS2Q6V1P9 2916 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 MEIS3P1A6NDR6 274 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 F5H5K5 113 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 NDUFA2O43678 99 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 SMPD2O60906 423 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 SCAF4O95104 1147 aaKnown RBP8.53□□□□□ -1.04
PMF1-204ENST00000466489 CDS2O95674 445 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 IGLV3-1P01715 115 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 PMP2P02689 132 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OR4A8P0C604 315 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 CCL2P13500 99 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OTX1P32242 354 aaPredicted RBP8.53□□□□□ -1.04
PMF1-204ENST00000466489 RPS27P42677 84 aaKnown RBP8.53□□□□□ -1.04
PMF1-204ENST00000466489 RBP2P50120 134 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 SULT1A2P50226 295 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 FUT6P51993 359 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 KRTAP10-9P60411 292 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 RAB5BP61020 215 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 NKX6-1P78426 367 aaPredicted RBP8.53□□□□□ -1.04
PMF1-204ENST00000466489 MALLQ13021 153 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 ZNF718Q3SXZ3 478 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OTPQ5XKR4 325 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 ASCL4Q6XD76 172 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 CFAP77Q6ZQR2 320 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 LINC00596Q86U02 117 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 SAXO1Q8IYX7 474 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 C15orf54Q8N8G6 183 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OR1J1Q8NGS3 322 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OR14K1Q8NGZ2 314 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 NUDCD2Q8WVJ2 157 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 APOBEC3DQ96AK3 386 aaPredicted RBP8.53□□□□□ -1.04
PMF1-204ENST00000466489 MICU1Q9BPX6 476 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 SLC25A31Q9H0C2 315 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 OR51B6Q9H340 312 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 DYNLRB1Q9NP97 96 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 TREM1Q9NP99 234 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 ANXA10Q9UJ72 324 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 ARID1AO14497 2285 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 APCP25054 2843 aa8.53□□□□□ -1.04
PMF1-204ENST00000466489 LOC100509620A0A075B734 347 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 H7C1Q1 480 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 M0R135 149 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 TGOLN2O43493 480 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 MT-ND4LP03901 98 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 FOLR2P14207 255 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 DUSP1P28562 367 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 RPL12P30050 165 aaKnown RBP8.52□□□□□ -1.05
PMF1-204ENST00000466489 P2RY1P47900 373 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 MTCP1P56278 107 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 KLF3P57682 345 aaPredicted RBP8.52□□□□□ -1.05
PMF1-204ENST00000466489 PPP1CBP62140 327 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 HGFACQ04756 655 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 DBPQ10586 325 aaPredicted RBP8.52□□□□□ -1.05
PMF1-204ENST00000466489 EFNB3Q15768 340 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 LRRC37A5PQ49AS3 106 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 AVPI1Q5T686 147 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 Q6ZS49 121 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 DTX2Q86UW9 622 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 OR8B12Q8NGG6 310 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 LILRB1Q8NHL6 650 aaPredicted RBP8.52□□□□□ -1.05
PMF1-204ENST00000466489 NRGNQ92686 78 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.05
PMF1-204ENST00000466489 MBD6Q96DN6 1003 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 ZNF799Q96GE5 643 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 NICN1Q9BSH3 213 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 ST6GALNAC5Q9BVH7 336 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 HIPK2Q9H2X6 1198 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 DUSP13Q9UII6 198 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 RNF150Q9ULK6 438 aa8.52□□□□□ -1.05
PMF1-204ENST00000466489 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
PMF1-204ENST00000466489 ARFGEF3Q5TH69 2177 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 KIR2DS1A0A191URI9 304 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 CRYM-AS1A6NIL9 109 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 RNASEK-C17orf49H0YIS7 233 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 DNASE2O00115 360 aaPredicted RBP8.51□□□□□ -1.05
PMF1-204ENST00000466489 ST8SIA3O43173 380 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 XRCC2O43543 280 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 SSX5O60225 188 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 DIRAS3O95661 229 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 TSPAN15O95858 294 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
PMF1-204ENST00000466489 LCATP04180 440 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 CSN2P05814 226 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 DANCRP0C864 163 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 OR5H8P0DN80 308 aa8.51□□□□□ -1.05
PMF1-204ENST00000466489 TMEM225BP0DP42 221 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms