RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SLC25A46Q96AG3 418 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
CLDN4-204ENST00000466411 UPRTQ96BW1 309 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 C1orf147Q96MC9 270 aaPredicted RBP5.7□□□□□ -1.5
CLDN4-204ENST00000466411 WDFY2Q96P53 400 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 DPCDQ9BVM2 203 aaPredicted RBP5.7□□□□□ -1.5
CLDN4-204ENST00000466411 PPIL3Q9H2H8 161 aaKnown RBP5.7□□□□□ -1.5
CLDN4-204ENST00000466411 ESM1Q9NQ30 184 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 PLEKHJ1Q9NW61 149 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 ONECUT1Q9UBC0 465 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 MAB21L2Q9Y586 359 aa5.7□□□□□ -1.5
CLDN4-204ENST00000466411 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SMIM31A0A1B0GVY4 71 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 ODAMA1E959 279 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 F8VVB4 439 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 F8VWA3 439 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SPINT2O43291 252 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 ORC5O43913 435 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 CLPXO76031 633 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 TFAP2AP05549 437 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 LPLP06858 475 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 PRTN3P24158 256 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 GLP1RP43220 463 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SERPINB10P48595 397 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SEC61A1P61619 476 aaKnown RBP5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SCN1BQ07699 218 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 FOXL1Q12952 345 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 TAF9Q16594 264 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 C2orf76Q3KRA6 126 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 PIGYQ3MUY2 71 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 UBE2NLQ5JXB2 153 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 Q6P435 159 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 HEPN1Q6WQI6 88 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 RBMS3Q6XE24 437 aaKnown RBP5.69□□□□□ -1.5
CLDN4-204ENST00000466411 ZNF497Q6ZNH5 498 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 C9orf139Q6ZV77 190 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 RTN4RL2Q86UN3 420 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 C1QL4Q86Z23 238 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 FAM185AQ8N0U4 392 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 ZDHHC22Q8N966 263 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 DTX3Q8N9I9 347 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SUMF2Q8NBJ7 301 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 C19orf18Q8NEA5 215 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 OR51D1Q8NGF3 324 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 TNFRSF14Q92956 283 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SLC25A28Q96A46 364 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 ORAI1Q96D31 301 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 S100A16Q96FQ6 103 aaKnown RBP5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 PPA2Q9H2U2 334 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 C12orf4Q9NQ89 552 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 DIABLOQ9NR28 239 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 PRR13Q9NZ81 148 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 KCNIP1Q9NZI2 227 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 DAPK2Q9UIK4 370 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 NUP50Q9UKX7 468 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 SPATA2Q9UM82 520 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 PEX16Q9Y5Y5 336 aa5.69□□□□□ -1.5
CLDN4-204ENST00000466411 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 HERC2O95714 4834 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 MEIKINA0A087WXM9 373 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 TRAV24A0A0B4J272 114 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 C17orf98A8MV24 154 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 C22orf46C9J442 243 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 LDLRAD4O15165 306 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 PSPNO60542 156 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 RGS11O94810 467 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 APOA1P02647 267 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CHATP28329 748 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 BLVRBP30043 206 aaPredicted RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 TALDO1P37837 337 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CEACAM3P40198 252 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 KIR2DS4P43632 304 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 UBE2E1P51965 193 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 SNU13P55769 128 aaKnown RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 QRFPP83859 136 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 MXD1Q05195 221 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 UNC119Q13432 240 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 EDDM3AQ14507 147 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 KIR2DS1Q14954 304 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CTF1Q16619 201 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 SRSF7Q16629 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 PNLIPRP3Q17RR3 467 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 HES5Q5TA89 166 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 BAIAP2L2Q6UXY1 529 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 Q6ZTK2 550 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CLVS1Q8IUQ0 354 aaPredicted RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 GAPTQ8N292 157 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 BPIFB2Q8N4F0 458 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM104Q8NE00 496 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 OR52M1Q8NGK5 317 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 OR10K1Q8NGX5 313 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 ZNF596Q8TC21 504 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 ZNF418Q8TF45 676 aaPredicted RBP5.68□□□□□ -1.5
CLDN4-204ENST00000466411 RAB3CQ96E17 227 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 SEH1LQ96EE3 360 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 CHST6Q9GZX3 395 aa5.68□□□□□ -1.5
CLDN4-204ENST00000466411 SIRPDQ9H106 197 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms