RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 LALBAP00709 142 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 GPR12P47775 334 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 EBI3Q14213 229 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 OR2G6Q5TZ20 316 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 C5orf24Q7Z6I8 188 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 MOB3BQ86TA1 216 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 ZNF565Q8N9K5 539 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 OR51D1Q8NGF3 324 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 TFAP2CQ92754 450 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 PLSCR3Q9NRY6 295 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 ST3GAL6Q9Y274 331 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 ORC6Q9Y5N6 252 aa16.17■□□□□ 0.18
COL6A1-203ENST00000466285 CCRL2O00421 344 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 OR7C1O76099 320 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-203ENST00000466285 SERPINA2P20848 420 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 MYCNOSP40205 109 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 ETV1P50549 477 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 RAB25P57735 213 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 ZNF695Q8IW36 515 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 IZUMO1Q8IYV9 350 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 HAVCR2Q8TDQ0 301 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 BARHL1Q9BZE3 327 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 STAB2Q8WWQ8 2551 aa16.16■□□□□ 0.18
COL6A1-203ENST00000466285 WBP4O75554 376 aaKnown RBP16.15■□□□□ 0.18
COL6A1-203ENST00000466285 RPSAP08865 295 aaKnown RBP16.15■□□□□ 0.18
COL6A1-203ENST00000466285 GBX2P52951 348 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-203ENST00000466285 DOC2BQ14184 412 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 NKAPLQ5M9Q1 402 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 DDI2Q5TDH0 399 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 DPF1Q92782 380 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 ST6GALNAC6Q969X2 333 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 TMEM106AQ96A25 262 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 PRR25Q96S07 402 aa16.15■□□□□ 0.18
COL6A1-203ENST00000466285 SDCBPO00560 298 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-203ENST00000466285 FADS2O95864 444 aaKnown RBP16.14■□□□□ 0.17
COL6A1-203ENST00000466285 CFHR3Q02985 330 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 RAB40BQ12829 278 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 NHLRC3Q5JS37 347 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 ZNF439Q8NDP4 499 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 OR52N1Q8NH53 320 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 RTN4IP1Q8WWV3 396 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-203ENST00000466285 ARL11Q969Q4 196 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 ABCG5Q9H222 651 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 IFT22Q9H7X7 185 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 DCLRE1BQ9H816 532 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 GFOD1Q9NXC2 390 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 ING4Q9UNL4 249 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 DNAH7Q8WXX0 4024 aa16.14■□□□□ 0.17
COL6A1-203ENST00000466285 RYR2Q92736 4967 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 TMEM30CPA0ZSE6 113 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 NCBP2LA6PVI3 153 aaKnown RBP16.13■□□□□ 0.17
COL6A1-203ENST00000466285 CCL24O00175 119 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 KCNJ3P48549 501 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 TGIF2LXQ8IUE1 241 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 FOXRED2Q8IWF2 684 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 OR10A7Q8NGE5 316 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 ZFP57Q9NU63 452 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 MRPS18AQ9NVS2 196 aaKnown RBP16.13■□□□□ 0.17
COL6A1-203ENST00000466285 IL36GQ9NZH8 169 aa16.13■□□□□ 0.17
COL6A1-203ENST00000466285 TRAV8-7A0A075B6U6 113 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 C12orf77C9JDV5 145 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 ZNF134P52741 427 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 F2RL1P55085 397 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 ATAD3CQ5T2N8 411 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 ZNF497Q6ZNH5 498 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 LINC00311Q8N616 119 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 ZFP41Q8N8Y5 198 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 OR10V1Q8NGI7 309 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 GPR148Q8TDV2 347 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 MRPL48Q96GC5 212 aaKnown RBP16.12■□□□□ 0.17
COL6A1-203ENST00000466285 WWC2-AS2Q96NR7 200 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL6A1-203ENST00000466285 LIN7CQ9NUP9 197 aaKnown RBP16.12■□□□□ 0.17
COL6A1-203ENST00000466285 FAM118AQ9NWS6 357 aa16.12■□□□□ 0.17
COL6A1-203ENST00000466285 LOC100130705A0A1B0GUX0 176 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 SNTNA6NMZ2 147 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 AP4M1O00189 453 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 GAPDHP04406 335 aaKnown RBP16.11■□□□□ 0.17
COL6A1-203ENST00000466285 IGFBP3P17936 291 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-203ENST00000466285 ZNF93P35789 620 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-203ENST00000466285 VHLP40337 213 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 SLC35B1P78383 322 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 DGCR2P98153 550 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 SLC22A6Q4U2R8 563 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 SLC16A12Q6ZSM3 486 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 FAM71E2Q8N5Q1 922 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 OR1L1Q8NH94 360 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 S1PR3Q99500 378 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 METTL9Q9H1A3 318 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 FGF20Q9NP95 211 aaPredicted RBP16.11■□□□□ 0.17
COL6A1-203ENST00000466285 CLEC2DQ9UHP7 191 aa16.11■□□□□ 0.17
COL6A1-203ENST00000466285 LSM4Q9Y4Z0 139 aaKnown RBP16.11■□□□□ 0.17
COL6A1-203ENST00000466285 MAGEB3O15480 346 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 MT-ND4P03905 459 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 RPS11P62280 158 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 MRPL28Q13084 256 aaKnown RBP16.1■□□□□ 0.17
COL6A1-203ENST00000466285 GPR50Q13585 617 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 GNMTQ14749 295 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 ASPHD1Q5U4P2 390 aa16.1■□□□□ 0.17
COL6A1-203ENST00000466285 COMMD1Q8N668 190 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms