RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PSIP1O75475 530 aaKnown RBP1.51□□□□□ -2.17
SMC4-205ENST00000465563 CDS2O95674 445 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 GPR75O95800 540 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 LTAP01374 205 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 SPNP16150 400 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 ZNF3P17036 446 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 COILP38432 576 aaPredicted RBP1.51□□□□□ -2.17
SMC4-205ENST00000465563 KRTAP12-1P59990 96 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 OR4D1Q15615 310 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 C10orf91Q5T1B1 145 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 C10orf107Q8IVU9 208 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 MUC15Q8N387 334 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 OR4A5Q8NH83 315 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 OR5P3Q8WZ94 311 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 CLDN23Q96B33 292 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 APOL4Q9BPW4 351 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 ACBD6Q9BR61 282 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 FAAP24Q9BTP7 215 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 TAPBPLQ9BX59 468 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 OR51E2Q9H255 320 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 RPUSD1Q9UJJ7 312 aaKnown RBP1.51□□□□□ -2.17
SMC4-205ENST00000465563 POMPQ9Y244 141 aa1.51□□□□□ -2.17
SMC4-205ENST00000465563 PTPRKQ15262 1439 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 PLXNA3P51805 1871 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 IGKV1-12A0A0C4DH73 117 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 A6NED7 52 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 C3orf84H3BNL1 204 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 J3QLI3 93 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 SH2D1AO60880 128 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 IGKV1D-12P01611 117 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 PSKH1P11801 424 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 NQO2P16083 231 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 ZNF22P17026 224 aaPredicted RBP1.5□□□□□ -2.17
SMC4-205ENST00000465563 PSMB9P28065 219 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 PYCR1P32322 319 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 UGT2B10P36537 528 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 INPP1P49441 399 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 PYCR3Q53H96 274 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 SSX7Q7RTT5 188 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 LRRC6Q86X45 466 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 NIT1Q86X76 327 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 HS3ST5Q8IZT8 346 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 C17orf78Q8N4C9 275 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 FER1L6-AS1Q8NA97 138 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 MRAP2Q96G30 205 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 FBXL15Q9H469 300 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 METTL17Q9H7H0 456 aaPredicted RBP1.5□□□□□ -2.17
SMC4-205ENST00000465563 MTCH2Q9Y6C9 303 aa1.5□□□□□ -2.17
SMC4-205ENST00000465563 NUP153P49790 1475 aaKnown RBP1.5□□□□□ -2.17
SMC4-205ENST00000465563 COL18A1P39060 1754 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 SDHAF1A6NFY7 115 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 LIMS3P0CW19 117 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 LIMS4P0CW20 117 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 SPAM1P38567 509 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 GZMMP51124 257 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 MP68P56378 58 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 RAB25P57735 213 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 SLAMF1Q13291 335 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 RAB31Q13636 194 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 FLOT2Q14254 428 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 USF2Q15853 346 aaPredicted RBP1.49□□□□□ -2.17
SMC4-205ENST00000465563 TMEM249Q2WGJ8 235 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 OLIG3Q7RTU3 272 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 SCXQ7RTU7 201 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 OR11G2Q8NGC1 345 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 OR10D4PQ8NGN7 298 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 IFT81Q8WYA0 676 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 DDIT4LQ96D03 193 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 FAM210AQ96ND0 272 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 HIGD2AQ9BW72 106 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 ARL6Q9H0F7 186 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 ZNF286AQ9HBT8 521 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 TREM1Q9NP99 234 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 SLC23A2Q9UGH3 650 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 PHLDA3Q9Y5J5 127 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 OR51B4Q9Y5P0 310 aa1.49□□□□□ -2.17
SMC4-205ENST00000465563 COL5A3P25940 1745 aaPredicted RBP1.49□□□□□ -2.17
SMC4-205ENST00000465563 GOLGA8IPA6NC78 632 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 IQCF5A8MTL0 148 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 MKRN2OSH3BPM6 223 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 ZNF73O43830 326 aaPredicted RBP1.48□□□□□ -2.17
SMC4-205ENST00000465563 S100A2P29034 98 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 CRABP2P29373 138 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 CBX5P45973 191 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 XRCC4Q13426 336 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 TCAIMQ8N3R3 496 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 C20orf166-AS1Q96NR2 134 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 CYTH2Q99418 400 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 NAGKQ9UJ70 344 aa1.48□□□□□ -2.17
SMC4-205ENST00000465563 COL11A1P12107 1806 aaPredicted RBP1.47□□□□□ -2.17
SMC4-205ENST00000465563 DSCAMO60469 2012 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 ADAMTSL1Q8N6G6 1762 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 HSBP1L1C9JCN9 74 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 GPR171O14626 319 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 SYNGR1O43759 233 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 SCN2BO60939 215 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 CTSGP08311 255 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 RAB2AP61019 212 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 FAM3AP98173 230 aa1.47□□□□□ -2.17
SMC4-205ENST00000465563 PAFAH1B3Q15102 231 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms