RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ABHD12Q8N2K0 398 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 ZNF565Q8N9K5 539 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 KCTD7Q96MP8 289 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 JMJD8Q96S16 334 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 LIN7BQ9HAP6 207 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 ZNF286AQ9HBT8 521 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 SPACA1Q9HBV2 294 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 VCX3AQ9NNX9 186 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 TRAPPC2LQ9UL33 140 aa9.47□□□□□ -0.89
CUX1-207ENST00000465461 IGHV3-43A0A0B4J1X8 118 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 ODF3BA8MYP8 253 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 C15orf65H3BRN8 121 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 AIREO43918 545 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 PAHP00439 452 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 RBP4P02753 201 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 IGHV3-43DP0DP04 118 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
CUX1-207ENST00000465461 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.9
CUX1-207ENST00000465461 IER3P46695 156 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 RAB13P51153 203 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 LGALS4P56470 323 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 TMEM50BP56557 158 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 MOGAT2Q3SYC2 334 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 MIDNQ504T8 468 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 OLFML2AQ68BL7 652 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 ZNF626Q68DY1 528 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 PRR18Q8N4B5 295 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 OR11H6Q8NGC7 330 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 ARL11Q969Q4 196 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 KIRREL1Q96J84 757 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
CUX1-207ENST00000465461 URM1Q9BTM9 101 aaKnown RBP9.46□□□□□ -0.9
CUX1-207ENST00000465461 CHIAQ9BZP6 476 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 NCOR1P1Q9H4R4 102 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 IDI2-AS1Q9NZ38 188 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 HILPDAQ9Y5L2 63 aa9.46□□□□□ -0.9
CUX1-207ENST00000465461 FBN1P35555 2871 aaKnown RBP9.45□□□□□ -0.9
CUX1-207ENST00000465461 A0A1W2PPE3 182 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 FOXI3A8MTJ6 420 aaPredicted RBP9.45□□□□□ -0.9
CUX1-207ENST00000465461 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 NPIPB11E5RHQ5 1161 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 IL1AP01583 271 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 FBP1P09467 338 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 GNG10P50151 68 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 PAX5Q02548 391 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 SSX2Q16385 188 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 LY6EQ16553 131 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 PLAC9Q5JTB6 97 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 SFXN4Q6P4A7 337 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 Q6ZPA2 131 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 TPRA1Q86W33 373 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 LDLRAD3Q86YD5 345 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 FAM89BQ8N5H3 189 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 OR1L1Q8NH94 360 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 SETD6Q8TBK2 473 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 MRPL30Q8TCC3 161 aaKnown RBP9.45□□□□□ -0.9
CUX1-207ENST00000465461 ARHGAP5-AS1Q96IT6 56 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 FUNDC2Q9BWH2 189 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 NAA50Q9GZZ1 169 aaKnown RBP9.45□□□□□ -0.9
CUX1-207ENST00000465461 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 AK3Q9UIJ7 227 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 RAB22AQ9UL26 194 aa9.45□□□□□ -0.9
CUX1-207ENST00000465461 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 H3BUX3 64 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
CUX1-207ENST00000465461 GZMHP20718 246 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 RPS19P39019 145 aaKnown RBP9.44□□□□□ -0.9
CUX1-207ENST00000465461 FAM189A2Q15884 450 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 OR52W1Q6IF63 320 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 Q6ZTK2 550 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 BEND2Q8NDZ0 799 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 OR4P4Q8NGL7 312 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 OR13F1Q8NGS4 319 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 OR5H6Q8NGV6 325 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 NDNFQ8TB73 568 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 FAM216AQ8WUB2 273 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 SSX3Q99909 188 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 PECRQ9BY49 303 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 ATG5Q9H1Y0 275 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 ZMAT3Q9HA38 289 aaKnown RBP9.44□□□□□ -0.9
CUX1-207ENST00000465461 FBLN5Q9UBX5 448 aa9.44□□□□□ -0.9
CUX1-207ENST00000465461 A0A075B6Q4 140 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 A0A087X0M5 115 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 A0A1B0GX30 115 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 SDCBPO00560 298 aaPredicted RBP9.43□□□□□ -0.9
CUX1-207ENST00000465461 TOR1AO14656 332 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 HBZP02008 142 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 GLAP06280 429 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 CFPP27918 469 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 VBP1P61758 197 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 NCS1P62166 190 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 ACTG1P63261 375 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 DIAPH2-AS1Q14236 149 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms