RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 THBS3P49746 956 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 RBM11P57052 281 aaKnown RBP16.48■□□□□ 0.23
CSPG5-204ENST00000465441 RPL23AP62750 156 aaKnown RBP16.48■□□□□ 0.23
CSPG5-204ENST00000465441 PPP3R1P63098 170 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 ZNF816Q0VGE8 651 aaPredicted RBP16.48■□□□□ 0.23
CSPG5-204ENST00000465441 EBI3Q14213 229 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 FAM53AQ6NSI3 398 aaPredicted RBP16.48■□□□□ 0.23
CSPG5-204ENST00000465441 TMPRSS11AQ6ZMR5 421 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 MOB3BQ86TA1 216 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 ZNF555Q8NEP9 628 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 CCDC107Q8WV48 283 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 ARL11Q969Q4 196 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 S100A13Q99584 98 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 ZFP57Q9NU63 452 aa16.48■□□□□ 0.23
CSPG5-204ENST00000465441 IGHV3-72A0A0B4J1Y9 119 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 IGHV1-3A0A0C4DH29 117 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 A0A1W2PP11 408 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 TMEM30CPA0ZSE6 113 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 LINC01548A6NM66 108 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 C15orf65H3BRN8 121 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 CCRL2O00421 344 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 LALBAP00709 142 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 HOXD3P31249 432 aaPredicted RBP16.47■□□□□ 0.23
CSPG5-204ENST00000465441 REG1BP48304 166 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 ATAD3CQ5T2N8 411 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 SLC35E3Q7Z769 313 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 OR51D1Q8NGF3 324 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 OR52M1Q8NGK5 317 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 OR13C5Q8NGS8 318 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 UBALD1Q8TB05 177 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 EAF1Q96JC9 268 aaPredicted RBP16.47■□□□□ 0.23
CSPG5-204ENST00000465441 CLEC2DQ9UHP7 191 aa16.47■□□□□ 0.23
CSPG5-204ENST00000465441 HSD17B6O14756 317 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 BAG2O95816 211 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 MT-ND4P03905 459 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 IGFBP3P17936 291 aaPredicted RBP16.46■□□□□ 0.23
CSPG5-204ENST00000465441 EGFEM1PQ0D2K5 195 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 MPV17LQ2QL34 196 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 C8orf86Q6ZUL3 223 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 OR2W3Q7Z3T1 314 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 LINC00596Q86U02 117 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 LINC00311Q8N616 119 aa16.46■□□□□ 0.23
CSPG5-204ENST00000465441 PAK1IP1Q9NWT1 392 aaPredicted RBP16.46■□□□□ 0.23
CSPG5-204ENST00000465441 IGHV3-43A0A0B4J1X8 118 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 SDCBPO00560 298 aaPredicted RBP16.45■□□□□ 0.22
CSPG5-204ENST00000465441 ZNF780AO75290 641 aaPredicted RBP16.45■□□□□ 0.22
CSPG5-204ENST00000465441 GPX5O75715 221 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 IGHV3-43DP0DP04 118 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 SLC35B1P78383 322 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 SLC22A6Q4U2R8 563 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 STPG2Q8N412 459 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 GHSRQ92847 366 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 SMIM19Q96E16 107 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 ZNF184Q99676 751 aaPredicted RBP16.45■□□□□ 0.22
CSPG5-204ENST00000465441 GFOD1Q9NXC2 390 aa16.45■□□□□ 0.22
CSPG5-204ENST00000465441 SMPD3Q9NY59 655 aaPredicted RBP16.45■□□□□ 0.22
CSPG5-204ENST00000465441 TRBV5-5A0A0J9YX44 114 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 NCBP2LA6PVI3 153 aaKnown RBP16.44■□□□□ 0.22
CSPG5-204ENST00000465441 ORC5O43913 435 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 GTF2F2P13984 249 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 MYCNOSP40205 109 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 RIPK1Q13546 671 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 DMKNQ6E0U4 476 aaPredicted RBP16.44■□□□□ 0.22
CSPG5-204ENST00000465441 FOXRED2Q8IWF2 684 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 NEK7Q8TDX7 302 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 ST6GALNAC6Q969X2 333 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 RDH12Q96NR8 316 aa16.44■□□□□ 0.22
CSPG5-204ENST00000465441 DIMT1Q9UNQ2 313 aaKnown RBP16.44■□□□□ 0.22
CSPG5-204ENST00000465441 EXOSC1Q9Y3B2 195 aaKnown RBP16.44■□□□□ 0.22
CSPG5-204ENST00000465441 IRGMA1A4Y4 181 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 MAGEA13PA6NCF6 341 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 NUDT19A8MXV4 375 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 RPS11P62280 158 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSPG5-204ENST00000465441 VAX1Q5SQQ9 334 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 ZNF497Q6ZNH5 498 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 TGIF2LXQ8IUE1 241 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 COMMD1Q8N668 190 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 Q8N6K4 173 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 C8orf31Q8N9H6 132 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 Q8N9W7 124 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 OR2T10Q8NGZ9 312 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 P2RX4Q99571 388 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 GPR61Q9BZJ8 451 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 ABCG5Q9H222 651 aa16.43■□□□□ 0.22
CSPG5-204ENST00000465441 DNAH9Q9NYC9 4486 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 TRAV8-7A0A075B6U6 113 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 A0A1W2PPK0 400 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 MYL12AP19105 171 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 GPR176Q14439 515 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 Q499Y3 187 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 IZUMO1Q8IYV9 350 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 ZFP41Q8N8Y5 198 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 KLHL30-AS1Q8NEE0 82 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 RTN4IP1Q8WWV3 396 aaPredicted RBP16.42■□□□□ 0.22
CSPG5-204ENST00000465441 TMEM80Q96HE8 168 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 PLSCR3Q9NRY6 295 aa16.42■□□□□ 0.22
CSPG5-204ENST00000465441 ZNF736B4DX44 427 aaPredicted RBP16.41■□□□□ 0.22
CSPG5-204ENST00000465441 MCRIP1C9JLW8 97 aa16.41■□□□□ 0.22
CSPG5-204ENST00000465441 AIPO00170 330 aa16.41■□□□□ 0.22
CSPG5-204ENST00000465441 SLC31A2O15432 143 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms