RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ETAA1Q9NY74 926 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 TGP01266 2768 aa14.44□□□□□ -0.1
COL7A1-205ENST00000465238 TMEM272A0A1B0GTI8 110 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 UBE2QL1A1L167 161 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 RNASEK-C17orf49H0YIS7 233 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 LDLRAD4O15165 306 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 TFAP2AP05549 437 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 BLVRBP30043 206 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-205ENST00000465238 GLP1RP43220 463 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 ALDH3B2P48448 385 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 KLRD1Q13241 179 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 FAM189A2Q15884 450 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 SFXN4Q6P4A7 337 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 ZNF782Q6ZMW2 699 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-205ENST00000465238 GPR141Q7Z602 305 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 LDLRAD3Q86YD5 345 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 DAPK2Q9UIK4 370 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 NOTCH1P46531 2555 aa14.43□□□□□ -0.1
COL7A1-205ENST00000465238 A0A0B4J203 849 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 ZNF729A6NN14 1252 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-205ENST00000465238 CA11O75493 328 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 IGHV1-8P0DP01 117 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 CHATP28329 748 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 UBE2E1P51965 193 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 FAM89BQ8N5H3 189 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 OR56B1Q8NGI3 324 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 OR13A1Q8NGR1 328 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 PLEKHJ1Q9NW61 149 aa14.42□□□□□ -0.1
COL7A1-205ENST00000465238 CMYA5Q8N3K9 4069 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 A0A0U1RQK1 487 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 A0A1W2PRD5 423 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 A0A1W2PRF3 423 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 A0A1W2PRM7 423 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 METTL21EPA6NDL7 271 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 SOCS1O15524 211 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 GPR137BO60478 399 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 CLPXO76031 633 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 IGHV4-59P01825 116 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 MT-ND4P03905 459 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 RAB6AP20340 208 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 GZMHP20718 246 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 COX7A1P24310 79 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 CDK2P24941 298 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 TGFBR1P36897 503 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 IER3P46695 156 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 VEGFCP49767 419 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 SRSF4Q08170 494 aaKnown RBP14.41□□□□□ -0.1
COL7A1-205ENST00000465238 IDNKQ5T6J7 187 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 GPR107Q5VW38 600 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 ZNF497Q6ZNH5 498 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 C6orf201Q7Z4U5 140 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 OR13D1Q8NGV5 346 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 MRGPRDQ8TDS7 321 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 CCDC107Q8WV48 283 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 CITED1Q99966 193 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 FAAP24Q9BTP7 215 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 SESN1Q9Y6P5 492 aa14.41□□□□□ -0.1
COL7A1-205ENST00000465238 A0A0A6YYD4 124 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 TRAV39A0A0B4J263 110 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 KBTBD11-OT1A0A1B0GTJ5 212 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 NPFFO15130 113 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 IL1AP01583 271 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 RPS19P39019 145 aaKnown RBP14.4□□□□□ -0.1
COL7A1-205ENST00000465238 RPL5P46777 297 aaKnown RBP14.4□□□□□ -0.1
COL7A1-205ENST00000465238 DEFA6Q01524 100 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 PLA2G7Q13093 441 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 PRAMEF5Q5TYX0 476 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 OR52W1Q6IF63 320 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 HCP5Q6MZN7 132 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 HEPN1Q6WQI6 88 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 ANKRD13BQ86YJ7 626 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 CROCCP3Q8IVE0 287 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 PNKDQ8N490 385 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 PTX4Q96A99 478 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 SULT4A1Q9BR01 284 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 DPAGT1Q9H3H5 408 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 CALYQ9NYX4 217 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 SCOCQ9UIL1 159 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 TRAPPC2LQ9UL33 140 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 FAM96BQ9Y3D0 163 aa14.4□□□□□ -0.1
COL7A1-205ENST00000465238 TMEM127O75204 238 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 CGB3P0DN86 165 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 CGB7P0DN87 165 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 SNRPBP14678 240 aaKnown RBP14.39□□□□□ -0.11
COL7A1-205ENST00000465238 SERPINB10P48595 397 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 EFNB2P52799 333 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 VBP1P61758 197 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 NCS1P62166 190 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 C17orf58Q2M2W7 97 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 PDLIM3Q53GG5 364 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-205ENST00000465238 Q6ZTK2 550 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 OR4K15Q8NH41 348 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 ATG5Q9H1Y0 275 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 TMEM133Q9H2Q1 129 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 HSF4Q9ULV5 492 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 RNF114Q9Y508 228 aa14.39□□□□□ -0.11
COL7A1-205ENST00000465238 MEIOCA2RUB1 952 aa14.38□□□□□ -0.11
COL7A1-205ENST00000465238 M0QZ24 198 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms