RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 IL5RAQ01344 420 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF616Q08AN1 781 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SIGLEC14Q08ET2 396 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 INCA1Q0VD86 236 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SRSF6Q13247 344 aaKnown RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF266Q14584 549 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR8G1Q15617 311 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SNRNP35Q16560 246 aaKnown RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TAF9Q16594 264 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM249Q2WGJ8 235 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SMIM21Q3B7S5 101 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SLC36A2Q495M3 483 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF684Q5T5D7 378 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OGFRL1Q5TC84 451 aaPredicted RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ADNP2Q6IQ32 1131 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 DNM1P34Q6PK57 102 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM205Q6UW68 189 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 FAM131AQ6UXB0 335 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SLC16A13Q7RTY0 426 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF547Q8IVP9 402 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 WDFY1Q8IWB7 410 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TCTE3Q8IZS6 198 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ACBD7Q8N6N7 88 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 CLDN22Q8N7P3 220 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 C11orf72Q8NBR9 251 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 ATP6V1C2Q8NEY4 427 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR4K5Q8NGD3 323 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR8J3Q8NGG0 315 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR56A4Q8NGH8 313 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR9Q1Q8NGQ5 310 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 OR10G6Q8NH81 332 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 CD200R1Q8TD46 325 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 CASTOR1Q8WTX7 329 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 PHF10Q8WUB8 498 aaKnown RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM239Q8WW34 195 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 DNAJB3Q8WWF6 145 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 DEDD2Q8WXF8 326 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM234Q8WY98 164 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 C11orf40Q8WZ69 217 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 FAM131CQ96AQ9 280 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 RPEQ96AT9 228 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 HYLS1Q96M11 299 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 LINC00477Q96M19 166 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 RNF157Q96PX1 679 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 KLF6Q99612 283 aaPredicted RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 HOPXQ9BPY8 73 aaPredicted RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM208Q9BTX3 173 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM109Q9BVC6 243 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 BEX2Q9BXY8 128 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 PORCNQ9H237 461 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 DCSTAMPQ9H295 470 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 FAM96AQ9H5X1 160 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 WDR55Q9H6Y2 383 aaPredicted RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 WDR54Q9H977 334 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 NLE1Q9NVX2 485 aaPredicted RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 RFNGQ9Y644 331 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 PSME4Q14997 1843 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 WNK3Q9BYP7 1800 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 TEX14Q8IWB6 1497 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 EIF4G3O43432 1585 aaKnown RBP2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 PLXNC1O60486 1568 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 SAMD9Q5K651 1589 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 NEURL4Q96JN8 1562 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 CROCC2H7BZ55 1655 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 DOCK9Q9BZ29 2069 aa2.18□□□□□ -2.06
HMGXB4-205ENST00000464480 USP42Q9H9J4 1324 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 BLMP54132 1417 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 FGD6Q6ZV73 1430 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 EPRSP07814 1512 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CDC42BPAQ5VT25 1732 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 PCM1Q15154 2024 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 IGHV3OR16-9A0A0B4J2B5 98 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 IGHV1-69DA0A0B4J2H0 117 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 A0A0G2JMP0 313 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 A0A0X1KG70 313 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 C7orf66A4D0T2 115 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 OR11H12B2RN74 326 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TRAPPC2LH3BP13 241 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 J3QRK9 145 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CXCR6O00574 342 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GABRPO00591 440 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 COPEO14579 308 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GYG2O15488 501 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TGOLN2O43493 480 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 KLRC4O43908 158 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 ORC5O43913 435 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 REM1O75628 298 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GLSO94925 669 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TNFSF15O95150 251 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GADD45GO95257 159 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TTC4O95801 387 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 MT-CO2P00403 227 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CST4P01036 141 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TCRBP04435 133 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GABRA1P14867 456 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 HIST1H1BP16401 226 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 NELFEP18615 380 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 IVDP26440 423 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 KDELR2P33947 212 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms