RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PSMB5P28074 263 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RBMXP38159 391 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MPLP40238 635 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RGRP47804 291 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 AMTP48728 403 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CLDN2P57739 230 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RUNX1Q01196 453 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 GGTA1PQ4G0N0 100 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PLEKHS1Q5SXH7 462 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 GLYATL3Q5SZD4 288 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PLPP4Q5VZY2 271 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 LCN12Q6JVE5 192 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF841Q6ZN19 808 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PAQR9Q6ZVX9 377 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FAM58AQ8N1B3 248 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 RNF128Q8TEB7 428 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM230Q96A57 120 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZG16BQ96DA0 208 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 NEURL3Q96EH8 262 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 FOXN4Q96NZ1 517 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MCHR1Q99705 422 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 C5orf66Q9H5L9 145 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF665Q9H7R5 613 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 C20orf141Q9NUB4 165 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TMEM30AQ9NV96 361 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OSER1Q9NX31 292 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 OBP2AQ9NY56 170 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 TAAR2Q9P1P5 351 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 NAT8Q9UHE5 227 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 CRLS1Q9UJA2 301 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 PSG8Q9UQ74 426 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 MRPS16Q9Y3D3 137 aaKnown RBP3.12□□□□□ -1.91
COL8A1-205ENST00000463753 DOCK5Q9H7D0 1870 aa3.12□□□□□ -1.91
COL8A1-205ENST00000463753 GAGE12HA6NDE8 117 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 DPRXA6NFQ7 191 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 C1QTNF3-AMACRE9PGA6 284 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CLEC3AO75596 197 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 H2BFMP0C1H6 154 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 FAM87AP0C7U9 286 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CRISP2P16562 243 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF43P17038 809 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 NTF3P20783 257 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 IL3RAP26951 378 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 OPRM1P35372 400 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 UQCRFS1P47985 274 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 RPL34P49207 117 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF133P52736 654 aaPredicted RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 TMPRSS3P57727 454 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 SSBP1Q04837 148 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 MEF2CQ06413 473 aaPredicted RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 AESQ08117 197 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 PCK2Q16822 640 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 NRN1LQ496H8 165 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 DUSP28Q4G0W2 176 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 MS4A13Q5J8X5 152 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 C9orf57Q5W0N0 161 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 OTPQ5XKR4 325 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF776Q68DI1 518 aaPredicted RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 KCNIP4Q6PIL6 250 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 GDF7Q7Z4P5 450 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 SLC39A11Q8N1S5 342 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CISD2Q8N5K1 135 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 STPG3Q8N7X2 389 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 OR10V1Q8NGI7 309 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 SCAMP5Q8TAC9 235 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 FGGYQ96C11 551 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 PERPQ96FX8 193 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 MRAP2Q96G30 205 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 UHRF2Q96PU4 802 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 LRRC61Q9BV99 259 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 VN1R1Q9GZP7 353 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 GP6Q9HCN6 339 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 MRPL27Q9P0M9 148 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CDC42EP3Q9UKI2 254 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 UTRNP46939 3433 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 HEATR5AQ86XA9 2040 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 NSG1A0A0A6YYJ2 146 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 TEX48A0A1B0GUV7 120 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 LOC102723971A0A1B0GUV8 181 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ZNF850A8MQ14 1090 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 IFNA5P01569 189 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CELA3BP08861 270 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ERGP11308 486 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CSNK2A2P19784 350 aaPredicted RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 ALOX5APP20292 161 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 HNRNPA2B1P22626 353 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CFHR2P36980 270 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 CLDN15P56746 228 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 TBPL1P62380 186 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 SUPT4H1P63272 117 aaKnown RBP3.11□□□□□ -1.91
COL8A1-205ENST00000463753 HSD52Q0P140 79 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 PSG3Q16557 428 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 STUMQ69YW2 141 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 C20orf196Q8IYI0 205 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 SYS1Q8N2H4 156 aa3.11□□□□□ -1.91
COL8A1-205ENST00000463753 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms