RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 C9J4A7 227 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 E2F6O75461 281 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 KLHL2O95198 593 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 SOX14O95416 240 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 EPPINO95925 133 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV5-2P06315 115 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 FBP1P09467 338 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF708P17019 499 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 PRPS1L1P21108 318 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 CD34P28906 385 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 TGFBR2P37173 567 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 MP68P56378 58 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF141Q15928 474 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 DEFB134Q4QY38 66 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 HENMT1Q5T8I9 393 aaKnown RBP1.56□□□□□ -2.16
HDAC6-212ENST00000461608 SDHAF4Q5VUM1 108 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 TTC33Q6PID6 262 aaPredicted RBP1.56□□□□□ -2.16
HDAC6-212ENST00000461608 SPNS3Q6ZMD2 512 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 CLEC20AQ6ZU45 233 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 ADM2Q7Z4H4 148 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 SELENOHQ8IZQ5 122 aaKnown RBP1.56□□□□□ -2.16
HDAC6-212ENST00000461608 LFNGQ8NES3 379 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 OR5L1Q8NGL2 311 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 ITFG2Q969R8 447 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 TMEM56Q96MV1 263 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 PKMYT1Q99640 499 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 HIGD2AQ9BW72 106 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 TAS2R13Q9NYV9 303 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 C15orf41Q9Y2V0 281 aa1.56□□□□□ -2.16
HDAC6-212ENST00000461608 TBL2Q9Y4P3 447 aaKnown RBP1.56□□□□□ -2.16
HDAC6-212ENST00000461608 EIF4G1Q04637 1599 aaKnown RBP1.55□□□□□ -2.16
HDAC6-212ENST00000461608 TRBV24-1A0A075B6N3 115 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 ARGFXA6NJG6 315 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 H3BMM0 161 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 CDK14O94921 469 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 CPSF4O95639 269 aaKnown RBP1.55□□□□□ -2.16
HDAC6-212ENST00000461608 TRGV3P03979 118 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 PET100P0DJ07 73 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 HRES1P13985 223 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 F8A1P23610 371 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 CRABP2P29373 138 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 AKR1C2P52895 323 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 RAB2AP61019 212 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 TAF9Q16594 264 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 TIMM23BQ5SRD1 257 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 CYHR1Q6ZMK1 362 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 PLEKHG7Q6ZR37 379 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 ZBTB8OSQ8IWT0 167 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 CD302Q8IX05 232 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 KRTCAP2Q8N6L1 136 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 STOML3Q8TAV4 291 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 SPPL2BQ8TCT7 592 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 RNASEH2CQ8TDP1 164 aaKnown RBP1.55□□□□□ -2.16
HDAC6-212ENST00000461608 KCTD4Q8WVF5 259 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 UBE2WQ96B02 151 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 GALMQ96C23 342 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 OR2D2Q9H210 308 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF586Q9NXT0 402 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 FBXL3Q9UKT7 428 aa1.55□□□□□ -2.16
HDAC6-212ENST00000461608 MCTS1Q9ULC4 181 aaKnown RBP1.55□□□□□ -2.16
HDAC6-212ENST00000461608 SEC16AO15027 2179 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 A0A0B4J2C4 111 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 GOLGA6L10A6NI86 522 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 A8MWP4 228 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 GPR171O14626 319 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 TOR1AO14656 332 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 MPZL2O60487 215 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 SH2D1AO60880 128 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 LTAP01374 205 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV1D-33P01593 117 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 IGKV1-33P01594 117 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 ORM1P02763 201 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 GYPCP04921 128 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 TPM3P06753 285 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 CTSEP14091 401 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF3P17036 446 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 PSMB6P28072 239 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 AGTR1P30556 359 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 MYL6P60660 151 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 TPM4P67936 248 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 DHRS2Q13268 280 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 SKP2Q13309 424 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 COTL1Q14019 142 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 ZNHIT3Q15649 155 aaPredicted RBP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 CENPWQ5EE01 88 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 CCDC122Q5T0U0 273 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 MARCH3Q86UD3 253 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 EIF4E3Q8N5X7 224 aaKnown RBP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 LY6G5BQ8NDX9 201 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 OR9I1Q8NGQ6 314 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 OR11L1Q8NGX0 322 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 OR51H1Q8NH63 302 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 ANP32BQ92688 251 aaKnown RBP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 FXYD5Q96DB9 178 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 RBP7Q96R05 134 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 DCUN1D5Q9BTE7 237 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms