RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 IGFBP3P17936 291 aaPredicted RBP18.07■□□□□ 0.48
PTPN4-207ENST00000460162 FSTP19883 344 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 ZNF816Q0VGE8 651 aaPredicted RBP18.07■□□□□ 0.48
PTPN4-207ENST00000460162 DIAPH2-AS1Q14236 149 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 Q499Y3 187 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 YIF1BQ5BJH7 314 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 SETD9Q8NE22 299 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 OR52M1Q8NGK5 317 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 OR13C5Q8NGS8 318 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 GHSRQ92847 366 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 RCC1LQ96I51 464 aaKnown RBP18.07■□□□□ 0.48
PTPN4-207ENST00000460162 C8orf4Q9NR00 106 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 TRAV39A0A0B4J263 110 aa18.06■□□□□ 0.48
PTPN4-207ENST00000460162 GPX5O75715 221 aa18.06■□□□□ 0.48
PTPN4-207ENST00000460162 DUS4LO95620 317 aaKnown RBP18.06■□□□□ 0.48
PTPN4-207ENST00000460162 TTC23Q5W5X9 447 aa18.06■□□□□ 0.48
PTPN4-207ENST00000460162 DMKNQ6E0U4 476 aaPredicted RBP18.06■□□□□ 0.48
PTPN4-207ENST00000460162 TMEM80Q96HE8 168 aa18.06■□□□□ 0.48
PTPN4-207ENST00000460162 CHCHD3Q9NX63 227 aaKnown RBP18.06■□□□□ 0.48
PTPN4-207ENST00000460162 C15orf65H3BRN8 121 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 IGKV1D-33P01593 117 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 IGKV1-33P01594 117 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 GTF2F2P13984 249 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 GPR176Q14439 515 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 SLC22A6Q4U2R8 563 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 ATAD3CQ5T2N8 411 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 C8orf31Q8N9H6 132 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 NEK7Q8TDX7 302 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 CHPT1Q8WUD6 406 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 CYGBQ8WWM9 190 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 ORAI1Q96D31 301 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 PGLYRP3Q96LB9 341 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 SPACA1Q9HBV2 294 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 CLEC2DQ9UHP7 191 aa18.05■□□□□ 0.48
PTPN4-207ENST00000460162 MAGEA13PA6NCF6 341 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 SDCBPO00560 298 aaPredicted RBP18.04■□□□□ 0.48
PTPN4-207ENST00000460162 ORC5O43913 435 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 TAS2R43P59537 309 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 RPS11P62280 158 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPN4-207ENST00000460162 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 LINC00311Q8N616 119 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 PACRGLQ8N7B6 248 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 ZNF485Q8NCK3 441 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 ARL11Q969Q4 196 aa18.04■□□□□ 0.48
PTPN4-207ENST00000460162 RCC2Q9P258 522 aaKnown RBP18.04■□□□□ 0.48
PTPN4-207ENST00000460162 A0A1W2PP11 408 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 A0A1W2PPE3 182 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 AIPO00170 330 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 CCRL2O00421 344 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 GAPDHP04406 335 aaKnown RBP18.03■□□□□ 0.48
PTPN4-207ENST00000460162 EBI3Q14213 229 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 Q3ZCU0 254 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 ZNF497Q6ZNH5 498 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 STX19Q8N4C7 294 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 OR51D1Q8NGF3 324 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 MRPS24Q96EL2 167 aaKnown RBP18.03■□□□□ 0.48
PTPN4-207ENST00000460162 GFOD1Q9NXC2 390 aa18.03■□□□□ 0.48
PTPN4-207ENST00000460162 TRAV8-7A0A075B6U6 113 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 IGHV1-3A0A0C4DH29 117 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 IGHG2P01859 326 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 IL3RAP26951 378 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 HNF4GQ14541 408 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 TMEM30BQ3MIR4 351 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 ZFP41Q8N8Y5 198 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 RAB9BQ9NP90 201 aa18.02■□□□□ 0.48
PTPN4-207ENST00000460162 MRPS28Q9Y2Q9 187 aaKnown RBP18.02■□□□□ 0.48
PTPN4-207ENST00000460162 TRBV5-7A0A0A0MS05 114 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 SERPINE3A8MV23 424 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 SLC6A1P30531 599 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 RPL23AP62750 156 aaKnown RBP18.01■□□□□ 0.47
PTPN4-207ENST00000460162 LRRC36Q1X8D7 754 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 SLC35E3Q7Z769 313 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 MOB3BQ86TA1 216 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 ZNF329Q86UD4 541 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 FOXRED2Q8IWF2 684 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 CDH26Q8IXH8 852 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 DHRSXQ8N5I4 330 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 JAGN1Q8N5M9 183 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 COMMD1Q8N668 190 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 LINC00482Q8N8I6 264 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 MUL1Q969V5 352 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 NOL4LQ96MY1 436 aaPredicted RBP18.01■□□□□ 0.47
PTPN4-207ENST00000460162 OR14A2Q96R54 314 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 GPR61Q9BZJ8 451 aa18.01■□□□□ 0.47
PTPN4-207ENST00000460162 MT-ND4P03905 459 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 REG1BP48304 166 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 SLC35B1P78383 322 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 ADARB1P78563 741 aaKnown RBP18■□□□□ 0.47
PTPN4-207ENST00000460162 ST3GAL4Q11206 333 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 ETV3LQ6ZN32 361 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 TGIF2LXQ8IUE1 241 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 Q8N6K4 173 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 CCDC107Q8WV48 283 aa18■□□□□ 0.47
PTPN4-207ENST00000460162 EAF1Q96JC9 268 aaPredicted RBP18■□□□□ 0.47
PTPN4-207ENST00000460162 CNOT2Q9NZN8 540 aaKnown RBP18■□□□□ 0.47
PTPN4-207ENST00000460162 FAM90A10PA6NDY2 464 aa17.99■□□□□ 0.47
PTPN4-207ENST00000460162 EFCAB10A6NFE3 127 aa17.99■□□□□ 0.47
PTPN4-207ENST00000460162 FAM90A7PA6NKC0 464 aa17.99■□□□□ 0.47
PTPN4-207ENST00000460162 FAM90A23PA8MXZ1 464 aa17.99■□□□□ 0.47
PTPN4-207ENST00000460162 MCRIP1C9JLW8 97 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms