RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LINC00596Q86U02 117 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 HMGCLL1Q8TB92 370 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 MYOZ3Q8TDC0 251 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 MFRPQ9BY79 579 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 WDR13Q9H1Z4 485 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 TAAR3PQ9P1P4 343 aa8.6□□□□□ -1.03
UFD1-205ENST00000459854 OR2J3O76001 311 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 C1QAP02745 245 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 PDPNQ86YL7 162 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 FBXL14Q8N1E6 418 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SCARF2Q96GP6 870 aaPredicted RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CA10Q9NS85 328 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 EFSO43281 561 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SRSF10O75494 262 aaKnown RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 SCRG1O75711 98 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 LIPFP07098 398 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 GRPP07492 148 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 LGALS4P56470 323 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 EIF3IQ13347 325 aaKnown RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 DCAF12Q5T6F0 453 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SAP25Q8TEE9 199 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 NUDT16L1Q9BRJ7 211 aaKnown RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 PKIBQ9C010 78 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 DECR2Q9NUI1 292 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 OBSL1O75147 1896 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 KLRC4-KLRK1H3BQV0 150 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CA11O75493 328 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 MELTFP08582 738 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 PNLIPP16233 465 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CD1CP29017 333 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 PPP1CAP62136 330 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 Q56UQ5 140 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CD200R1LQ6Q8B3 271 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SPNS3Q6ZMD2 512 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 NIT1Q86X76 327 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 OR10S1Q8NGN2 331 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 OR10X1Q8NGY0 326 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 OR1F12Q8NHA8 337 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CNRIP1Q96F85 164 aaPredicted RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SLC26A1Q9H2B4 701 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 MYOZ1Q9NP98 299 aaPredicted RBP8.59□□□□□ -1.03
UFD1-205ENST00000459854 ZNF355PQ9NSJ1 428 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CLDN16Q9Y5I7 305 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 RAB29O14966 203 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 ETHE1O95571 254 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 B3GALT4O96024 378 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 HOXA5P20719 270 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 EMDP50402 254 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 GGTLC2Q14390 218 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 SGMS2Q8NHU3 365 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 TMEM230Q96A57 120 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
UFD1-205ENST00000459854 OR5B21A6NL26 309 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 CAMPP49913 170 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 RRADP55042 308 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 GUSBP11Q6P575 273 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 C17orf78Q8N4C9 275 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 TMEM178AQ8NBL3 297 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 SPACA5Q96QH8 159 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 TLNRD1Q9H1K6 362 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 MSL2Q9HCI7 577 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 IL19Q9UHD0 177 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 VENTXO95231 258 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 FGF8P55075 233 aaPredicted RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 DLX1P56177 255 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 TCL1AP56279 114 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 RAE1P78406 368 aaKnown RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 TGIF2LYQ8IUE0 185 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 SPNS2Q8IVW8 549 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 C1QTNF6Q9BXI9 259 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 SLC6A13Q9NSD5 602 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 CHST1O43916 411 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 MEOX1P50221 254 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 ZNF816Q0VGE8 651 aaPredicted RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 TMEM91Q6ZNR0 172 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 CNEP1R1Q8N9A8 125 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 ASB5Q8WWX0 329 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 NCOR1P1Q9H4R4 102 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 NYNRINQ9P2P1 1898 aaKnown RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 CELA2BP08218 269 aaPredicted RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 KLF3P57682 345 aaPredicted RBP8.58□□□□□ -1.04
UFD1-205ENST00000459854 LSM11P83369 360 aaKnown RBP eCLIP8.58□□□□□ -1.04
UFD1-205ENST00000459854 KCNAB1Q14722 419 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 C16orf52Q8NHV5 167 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 VSTM2AQ8TAG5 236 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms