RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SERTAD4Q9NUC0 356 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
COL7A1-203ENST00000459756 GHRLQ9UBU3 117 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 CMYA5Q8N3K9 4069 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 MCRIP1C9JLW8 97 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 J3QR06 171 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 SSTR5P35346 364 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 MNDAP41218 407 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 UTF1Q5T230 341 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 CFHR4Q92496 578 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 UFD1Q92890 307 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 SELENOIQ9C0D9 397 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 LIN7BQ9HAP6 207 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 PSG11Q9UQ72 335 aa12.93□□□□□ -0.34
COL7A1-203ENST00000459756 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-203ENST00000459756 CRTAPO75718 401 aaPredicted RBP12.92□□□□□ -0.34
COL7A1-203ENST00000459756 MT-ND4P03905 459 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 VSIG10L2P0DP72 767 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 MGMTP16455 207 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 MADCAM1Q13477 382 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 HABP2Q14520 560 aaPredicted RBP12.92□□□□□ -0.34
COL7A1-203ENST00000459756 INSL4Q14641 139 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 TBCEQ15813 527 aaPredicted RBP12.92□□□□□ -0.34
COL7A1-203ENST00000459756 LTC4SQ16873 150 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 LIPKQ5VXJ0 399 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 RAB12Q6IQ22 244 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 CAPSLQ8WWF8 208 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 RPEQ96AT9 228 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 CST11Q9H112 138 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 BANF2Q9H503 90 aa12.92□□□□□ -0.34
COL7A1-203ENST00000459756 AIPO00170 330 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ORC5O43913 435 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 CA11O75493 328 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 SC5DO75845 299 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 GLAP06280 429 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 UBBP0CG47 229 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 CD24P25063 80 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 GP2P55259 537 aaKnown RBP12.91□□□□□ -0.34
COL7A1-203ENST00000459756 BLCAPP62952 87 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ARSJQ5FYB0 599 aaPredicted RBP12.91□□□□□ -0.34
COL7A1-203ENST00000459756 FAM27D1Q5T7N8 215 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ZNF367Q7RTV3 350 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 CEACAM19Q7Z692 300 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 TMEM104Q8NE00 496 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 OR52M1Q8NGK5 317 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 LEAP2Q969E1 77 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ARL11Q969Q4 196 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 TMEM203Q969S6 136 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 Q96M66 194 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 YTHDF1Q9BYJ9 559 aaKnown RBP12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ACOT13Q9NPJ3 140 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 ETAA1Q9NY74 926 aa12.91□□□□□ -0.34
COL7A1-203ENST00000459756 C15orf65H3BRN8 121 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 PEX14O75381 377 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 OR2F2O95006 317 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 TSPAN15O95858 294 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 IGHV3-7P01780 117 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 CSF1P09603 554 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 UCHL1P09936 223 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 FAM106CPP0CH98 169 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 SRMP19623 302 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 FUT3P21217 361 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 GNG10P50151 68 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 EMX1Q04741 257 aaPredicted RBP12.9□□□□□ -0.34
COL7A1-203ENST00000459756 TPBGQ13641 420 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 SPARTQ8N0X7 666 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 GAPTQ8N292 157 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 OR10X1Q8NGY0 326 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 RBM14Q96PK6 669 aaKnown RBP12.9□□□□□ -0.34
COL7A1-203ENST00000459756 MGLLQ99685 303 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 ISYNA1Q9NPH2 558 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 PEX16Q9Y5Y5 336 aa12.9□□□□□ -0.34
COL7A1-203ENST00000459756 SDCBPO00560 298 aaPredicted RBP12.89□□□□□ -0.35
COL7A1-203ENST00000459756 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
COL7A1-203ENST00000459756 PSMB9P28065 219 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 VDAC2P45880 294 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms