RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 KIR2DS1A0A191URI9 304 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 TMEM218A2RU14 115 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 WNT9BO14905 357 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 JTBO76095 146 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 IGKV1-13P0DP09 117 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 KIR2DS4P43632 304 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 SSTP61278 116 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 SSX2Q16385 188 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 OR1K1Q8NGR3 316 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 RTL8AQ9BWD3 113 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 SPRR3Q9UBC9 169 aa10.26□□□□□ -0.77
SMPD4-213ENST00000454468 KRASP01116 189 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 PTAFRP25105 342 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 G0S2P27469 103 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 EDDM3BP56851 147 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 RUNX1Q01196 453 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF816Q0VGE8 651 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 ASB13Q8WXK3 278 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 H0YL77 283 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 MSTNO14793 375 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HMGB3O15347 200 aaKnown RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HOXB1P14653 301 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 DTYMKP23919 212 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 ECI1P42126 302 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF83P51522 516 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HIST1H3AP68431 136 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HIST2H3PS2Q5TEC6 136 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 VWA1Q6PCB0 445 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HIST2H3AQ71DI3 136 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 PUSL1Q8N0Z8 303 aaKnown RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 SFT2D1Q8WV19 159 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 HINT2Q9BX68 163 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 C1QTNF5Q9BXJ0 243 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 LPAR3Q9UBY5 353 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF391Q9UJN7 358 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 RNASEK-C17orf49H0YIS7 233 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 CST4P01036 141 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 SFTA3P0C7M3 94 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 MUC1P15941 1255 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-213ENST00000454468 CEACAM6P40199 344 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 WNT5AP41221 380 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 SPANXN5Q5MJ07 72 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 GPR157Q5UAW9 335 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 BTNL3Q6UXE8 466 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 S100PBPQ96BU1 408 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 SPACA1Q9HBV2 294 aa10.25□□□□□ -0.77
SMPD4-213ENST00000454468 CPAMD8Q8IZJ3 1885 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 A8MXK9 166 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 SURF2Q15527 256 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-213ENST00000454468 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 CCDC54Q8NEL0 328 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 SPIN2AQ99865 258 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 SPIN2BQ9BPZ2 258 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 CHST1O43916 411 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 PSG2P11465 335 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 RAB13P51153 203 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 AESQ08117 197 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 PJVKQ0ZLH3 352 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 ZNF154Q13106 437 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 TMEM187Q14656 261 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 OR8B8Q15620 311 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 CRIP3Q6Q6R5 217 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 MRGPRDQ8TDS7 321 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 POM121L2Q96KW2 1035 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 PRDM14Q9GZV8 571 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 UQCC1Q9NVA1 299 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 OR3A1P47881 315 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 ELLP55199 621 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-213ENST00000454468 FGF12P61328 243 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 AKR1C8PQ5T2L2 129 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 OR5T1Q8NG75 326 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 ISOC2Q96AB3 205 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 SSX3Q99909 188 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 OPN3Q9H1Y3 402 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-213ENST00000454468 KCNJ16Q9NPI9 418 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 GSN-AS1Q9NRJ2 163 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
SMPD4-213ENST00000454468 DEDDO75618 318 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 TMEM211Q6ICI0 200 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 OR2C3Q8N628 320 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 OR2Z1Q8NG97 314 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 OR5A2Q8NGI9 324 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 SCGB1C1Q8TD33 95 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 IP6K3Q96PC2 410 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 NUDT16L1Q9BRJ7 211 aaKnown RBP10.23□□□□□ -0.77
SMPD4-213ENST00000454468 URGCP-MRPS24S4R325 110 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 DBX1A6NMT0 343 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 M0R1B8 84 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 KLK10O43240 276 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 CLDN1O95832 211 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 IL18BPO95998 194 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 METTL15P1P0C7V9 234 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 RAC2P15153 192 aa10.23□□□□□ -0.77
SMPD4-213ENST00000454468 NPBWR1P48145 328 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms