RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TMEM100Q9NV29 134 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 RCC2Q9P258 522 aaKnown RBP9.63□□□□□ -0.87
DDR1-239ENST00000452441 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 A0A1W2PNV4 684 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 PROB1E7EW31 1015 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 SCAF4O95104 1147 aaKnown RBP9.63□□□□□ -0.87
DDR1-239ENST00000452441 IFNA17P01571 189 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 ZNF83P51522 516 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 FUT6P51993 359 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 Q0VFX4 171 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 ZNF528Q3MIS6 628 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 LHFPL2Q6ZUX7 228 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 ZNF552Q9H707 407 aaPredicted RBP9.63□□□□□ -0.87
DDR1-239ENST00000452441 CST4P01036 141 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 HKR1P10072 659 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 MPZP25189 248 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 MEOX2P50222 304 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 ERVS71-1P61550 626 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 VAX1Q5SQQ9 334 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 HIST2H3AQ71DI3 136 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 ADAMTS17Q8TE56 1095 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 C19orf12Q9NSK7 152 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 TINAGQ9UJW2 476 aa9.63□□□□□ -0.87
DDR1-239ENST00000452441 SETD2Q9BYW2 2564 aaPredicted RBP9.63□□□□□ -0.87
DDR1-239ENST00000452441 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 TRBV6-7A0A0A0MS04 114 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 IGKV1-12A0A0C4DH73 117 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 IGKV1D-12P01611 117 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 ZNF239Q16600 458 aaKnown RBP9.62□□□□□ -0.87
DDR1-239ENST00000452441 DHRS11Q6UWP2 260 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 CPEB3Q8NE35 698 aaKnown RBP9.62□□□□□ -0.87
DDR1-239ENST00000452441 ZPBPQ9BS86 351 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 IFT22Q9H7X7 185 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 SMCO4Q9NRQ5 59 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 OR2C1O95371 312 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 DYNLT3P51808 116 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 ZNF385CQ66K41 422 aaPredicted RBP9.62□□□□□ -0.87
DDR1-239ENST00000452441 OR2C3Q8N628 320 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 CCDC168Q8NDH2 2452 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 AQP10Q96PS8 301 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 B4E171 279 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 C9JQL5 133 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 M0R1B8 84 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 RHBDL1O75783 438 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 TSPAN7P41732 249 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 ZFP36L1Q07352 338 aaKnown RBP9.62□□□□□ -0.87
DDR1-239ENST00000452441 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 ADIRFQ15847 76 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 SPSB1Q96BD6 273 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
DDR1-239ENST00000452441 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 C7orf77A4D0Y5 90 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 ALDH3B1P43353 468 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 UBE2G2P60604 165 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 FAM3AP98173 230 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 HIST2H3PS2Q5TEC6 136 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 NUFIP2Q7Z417 695 aaKnown RBP9.61□□□□□ -0.87
DDR1-239ENST00000452441 C1orf147Q96MC9 270 aaPredicted RBP9.61□□□□□ -0.87
DDR1-239ENST00000452441 GNG12Q9UBI6 72 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 CACNG5Q9UF02 275 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 CPAMD8Q8IZJ3 1885 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 FTH1P19P0C7X4 201 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 TBC1D28Q2M2D7 210 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 EIF2S3LQ2VIR3 472 aaKnown RBP9.61□□□□□ -0.87
DDR1-239ENST00000452441 SPIN2AQ99865 258 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 SPIN2BQ9BPZ2 258 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 WNT5BQ9H1J7 359 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 FANCFQ9NPI8 374 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 MPPED1O15442 326 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 SP1P08047 785 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 MMP9P14780 707 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 CHATP28329 748 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 LRP11Q86VZ4 500 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 POC1AQ8NBT0 407 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 FRZBQ92765 325 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 OR2J1Q9GZK6 312 aa9.61□□□□□ -0.87
DDR1-239ENST00000452441 A0A1W2PPE3 182 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 PRSS44E7EML9 344 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 SPRY3O43610 288 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 PSG2P11465 335 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 RAC2P15153 192 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 CEACAM6P40199 344 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 SELENOVP59797 346 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 RBMS3Q6XE24 437 aaKnown RBP9.6□□□□□ -0.87
DDR1-239ENST00000452441 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 ZNF709Q8N972 641 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 FADS6Q8N9I5 356 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 ZIC4Q8N9L1 334 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 TCTEX1D2Q8WW35 142 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 SAT2Q96F10 170 aaPredicted RBP9.6□□□□□ -0.87
DDR1-239ENST00000452441 TMEM204Q9BSN7 226 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 ANKHD1Q8IWZ3 2542 aaKnown RBP9.6□□□□□ -0.87
DDR1-239ENST00000452441 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
DDR1-239ENST00000452441 NTN3O00634 580 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms