RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CLEC7AQ9BXN2 247 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 LPAR5Q9H1C0 372 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 MEGF9Q9H1U4 602 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 ETAA1Q9NY74 926 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 CALYQ9NYX4 217 aa16.19■□□□□ 0.18
COL9A3-202ENST00000452372 TBL2Q9Y4P3 447 aaKnown RBP16.19■□□□□ 0.18
COL9A3-202ENST00000452372 TRAV39A0A0B4J263 110 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 LDLRAD4O15165 306 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 IL1AP01583 271 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 CHATP28329 748 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 C16orf87Q6PH81 154 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 BAIAP2L2Q6UXY1 529 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 RTN4RL2Q86UN3 420 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 NR2C2APQ86WQ0 139 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 ABHD12Q8N2K0 398 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 FAM89BQ8N5H3 189 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 CCDC107Q8WV48 283 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 NICN1Q9BSH3 213 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 DPAGT1Q9H3H5 408 aa16.18■□□□□ 0.18
COL9A3-202ENST00000452372 CMYA5Q8N3K9 4069 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 MEGF8Q7Z7M0 2845 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 A0A087X0M5 115 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 A0A0A6YYD4 124 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 A0A1B0GX30 115 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 UBE2QL1A1L167 161 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 AIPO00170 330 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 IGHV4-59P01825 116 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 CD34P28906 385 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 DYNC1I2Q13409 638 aaKnown RBP16.17■□□□□ 0.18
COL9A3-202ENST00000452372 NKAPLQ5M9Q1 402 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 GDPGP1Q6ZNW5 385 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 LHFPL4Q7Z7J7 247 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 OR10A7Q8NGE5 316 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 DYRK2Q92630 601 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 MALSU1Q96EH3 234 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 KIRREL1Q96J84 757 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 CHIAQ9BZP6 476 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 IDI2-AS1Q9NZ38 188 aa16.17■□□□□ 0.18
COL9A3-202ENST00000452372 LOC100506127A0A0U1RQW1 187 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 ORC5O43913 435 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 HKR1P10072 659 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 BLVRBP30043 206 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-202ENST00000452372 SSTR5P35346 364 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 TIMM50Q3ZCQ8 353 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 LDLRAD2Q5SZI1 272 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 MINOS1Q5TGZ0 78 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 RFESDQ8TAC1 157 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 YIPF6Q96EC8 236 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 SULT4A1Q9BR01 284 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 TNFRSF19Q9NS68 423 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 RAB22AQ9UL26 194 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 MINOS1-NBL1R4GNA1 71 aa16.16■□□□□ 0.18
COL9A3-202ENST00000452372 TMEM272A0A1B0GTI8 110 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 NOTOA8MTQ0 251 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 C15orf65H3BRN8 121 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 SOCS1O15524 211 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 NFYBP25208 207 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 SDC2P34741 201 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 AANATQ16613 207 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 C6orf201Q7Z4U5 140 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 OR4K15Q8NH41 348 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 ARL11Q969Q4 196 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 CYYR1Q96J86 154 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 FAAP24Q9BTP7 215 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 CENPOQ9BU64 300 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 RNF167Q9H6Y7 350 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 ZNF286AQ9HBT8 521 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 PLEKHJ1Q9NW61 149 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 TRAPPC2LQ9UL33 140 aa16.15■□□□□ 0.18
COL9A3-202ENST00000452372 SMIM30A4D0T7 59 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 FAM172BPA6NC97 362 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 FOXI3A8MTJ6 420 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-202ENST00000452372 IGLV1-47P01700 117 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 VEGFCP49767 419 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 UTF1Q5T230 341 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 SLC16A12Q6ZSM3 486 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 OR4P4Q8NGL7 312 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 OR5R1Q8NH85 324 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 SGMS2Q8NHU3 365 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 ZNF596Q8TC21 504 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 SSX3Q99909 188 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 ZNF747Q9BV97 191 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 LIN7BQ9HAP6 207 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 HSF4Q9ULV5 492 aa16.14■□□□□ 0.17
COL9A3-202ENST00000452372 BTBD17A6NE02 478 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 TOR1AO14656 332 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 SLC2A2P11168 524 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-202ENST00000452372 RAB6AP20340 208 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 PAX6P26367 422 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 HTR1DP28221 377 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 PRRX1P54821 245 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 TMEM50BP56557 158 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 PLA2G7Q13093 441 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 SSX2Q16385 188 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 LRRC75BQ2VPJ9 315 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 C6orf183Q5T699 404 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 TRAT1Q6PIZ9 186 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 DYNAPQ8N1N2 210 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 OR56B1Q8NGI3 324 aa16.13■□□□□ 0.17
COL9A3-202ENST00000452372 OR52M1Q8NGK5 317 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms