RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 NEK7Q8TDX7 302 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 NEDD4LQ96PU5 975 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 SULT4A1Q9BR01 284 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 CENPOQ9BU64 300 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 MBNL3Q9NUK0 354 aaKnown RBP11.66□□□□□ -0.54
COL3A1-203ENST00000450867 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
COL3A1-203ENST00000450867 A0A1W2PRD5 423 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 A0A1W2PRF3 423 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 A0A1W2PRM7 423 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 TMEM127O75204 238 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 NAPSAO96009 420 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 SDC2P34741 201 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 FAM189A2Q15884 450 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 TMEM30BQ3MIR4 351 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 LDLRAD2Q5SZI1 272 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 MINOS1Q5TGZ0 78 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 SLC16A12Q6ZSM3 486 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 OR52M1Q8NGK5 317 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 OR13F1Q8NGS4 319 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 MRGPRDQ8TDS7 321 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 C17orf50Q8WW18 174 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 DYRK2Q92630 601 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 C19orf24Q9BVV8 132 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 LIN7BQ9HAP6 207 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 RAB22AQ9UL26 194 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 MINOS1-NBL1R4GNA1 71 aa11.65□□□□□ -0.54
COL3A1-203ENST00000450867 DNHD1Q96M86 4753 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 POM121CA8CG34 1229 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 VGLL3A8MV65 326 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 F2RL2O00254 374 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 SOCS1O15524 211 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 OMGP23515 440 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 BLVRBP30043 206 aaPredicted RBP11.64□□□□□ -0.55
COL3A1-203ENST00000450867 SSTR5P35346 364 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 TMEM50BP56557 158 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 SCAND1P57086 179 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 RPL15P61313 204 aaKnown RBP11.64□□□□□ -0.55
COL3A1-203ENST00000450867 C6orf183Q5T699 404 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 C6orf201Q7Z4U5 140 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
COL3A1-203ENST00000450867 OR56B1Q8NGI3 324 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 MRPL30Q8TCC3 161 aaKnown RBP11.64□□□□□ -0.55
COL3A1-203ENST00000450867 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 CYYR1Q96J86 154 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 MRPS26Q9BYN8 205 aaKnown RBP11.64□□□□□ -0.55
COL3A1-203ENST00000450867 RNF167Q9H6Y7 350 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 ZNF286AQ9HBT8 521 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
COL3A1-203ENST00000450867 UBE2QL1A1L167 161 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 C12orf77C9JDV5 145 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 AIREO43918 545 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 PAHP00439 452 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 IGHV4-59P01825 116 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 ARG1P05089 322 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 SLC2A2P11168 524 aaPredicted RBP11.63□□□□□ -0.55
COL3A1-203ENST00000450867 DYNLT3P51808 116 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 LGALS4P56470 323 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 PLA2G7Q13093 441 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 Q3ZCU0 254 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 NKAPLQ5M9Q1 402 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 C16orf87Q6PH81 154 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 BAIAP2L2Q6UXY1 529 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 C8orf31Q8N9H6 132 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 OR5R1Q8NH85 324 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 ZNF596Q8TC21 504 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 FAAP24Q9BTP7 215 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 CHIAQ9BZP6 476 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 DPAGT1Q9H3H5 408 aa11.63□□□□□ -0.55
COL3A1-203ENST00000450867 RIMS4Q9H426 269 aaPredicted RBP11.63□□□□□ -0.55
COL3A1-203ENST00000450867 TRAV39A0A0B4J263 110 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 RAB27BO00194 218 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 CLEC2LP0C7M8 214 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 RCC1P18754 421 aaPredicted RBP11.62□□□□□ -0.55
COL3A1-203ENST00000450867 ALDH3B2P48448 385 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 COMPP49747 757 aaPredicted RBP11.62□□□□□ -0.55
COL3A1-203ENST00000450867 VEGFCP49767 419 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 EFNB2P52799 333 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 LOXL3P58215 753 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 LRRC75BQ2VPJ9 315 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 PLAC9Q5JTB6 97 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 UTF1Q5T230 341 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
COL3A1-203ENST00000450867 OR4K15Q8NH41 348 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms