RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DEGS1O15121 323 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 NDUFB3O43676 98 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 HAND1O96004 215 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 HKR1P10072 659 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 PSG2P11465 335 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNF44P15621 663 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 GABRR1P24046 479 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 PRDX2P32119 198 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 MADCAM1Q13477 382 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 TAF9Q16594 264 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 PIGYQ3MUY2 71 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 METTL11BQ5VVY1 283 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 STUMQ69YW2 141 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 SLC36A1Q7Z2H8 476 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 PDZD9Q8IXQ8 264 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 CHST4Q8NCG5 386 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 PPP1R35Q8TAP8 253 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 LHX4Q969G2 390 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 MED30Q96HR3 178 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 NEDD4LQ96PU5 975 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 LPAR5Q9H1C0 372 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 ABCG5Q9H222 651 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 RPUSD1Q9UJJ7 312 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 GEMIN2O14893 280 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 CTDSPLO15194 276 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 PLA2G10O15496 165 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 HOXA3O43365 443 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 ORC5O43913 435 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 OR7C1O76099 320 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 ECDO95905 644 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 RNASE1P07998 156 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 VEGFCP49767 419 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 MRPS10P82664 201 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 PRB3Q04118 309 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 ARL6IP1Q15041 203 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 ATAD3CQ5T2N8 411 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 ATPAF1Q5TC12 328 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 FAM89BQ8N5H3 189 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 DUSP18Q8NEJ0 188 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 H1FXQ92522 213 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 IFT22Q9H7X7 185 aa14.01□□□□□ -0.17
PRPF40A-204ENST00000450303 GSTZ1O43708 216 aaPredicted RBP14□□□□□ -0.17
PRPF40A-204ENST00000450303 CCNKO75909 580 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 FUT3P21217 361 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 DUSP1P28562 367 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
PRPF40A-204ENST00000450303 EFNB2P52799 333 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 AP3S2P59780 193 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 CMTM4Q8IZR5 234 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNF561Q8N587 486 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 ANGPTL6Q8NI99 470 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 GAFA1Q96PS6 74 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 ZMAT3Q9HA38 289 aaKnown RBP14□□□□□ -0.17
PRPF40A-204ENST00000450303 ONECUT1Q9UBC0 465 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 IL36RNQ9UBH0 155 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNF221Q9UK13 617 aa14□□□□□ -0.17
PRPF40A-204ENST00000450303 IGKV1D-17A0A075B6S4 117 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 MEIOCA2RUB1 952 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 HMX3A6NHT5 357 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 MCRIP1C9JLW8 97 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 OR2H2O95918 312 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 GLAP06280 429 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 GSTT2BP0CG30 244 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 DLX1P56177 255 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 FOXL1Q12952 345 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 PLA2G7Q13093 441 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 RBM39Q14498 530 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 PDCD1Q15116 288 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 LRRC10Q5BKY1 277 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNF788Q6ZQV5 615 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 Q6ZTK2 550 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 VMO1Q7Z5L0 202 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 TOMM5Q8N4H5 51 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 LY6G5BQ8NDX9 201 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 OR5D13Q8NGL4 314 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 OR10R2Q8NGX6 335 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 SLC25A38Q96DW6 304 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 SDSLQ96GA7 329 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 NICN1Q9BSH3 213 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 PLEKHJ1Q9NW61 149 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 COPZ2Q9P299 210 aa13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 MRPS7Q9Y2R9 242 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-204ENST00000450303 IGHV1-69DA0A0B4J2H0 117 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 CLDN34H7C241 214 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 SIRPB1O00241 398 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 PDCD6O75340 191 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 IGHV1-69P01742 117 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 OMGP23515 440 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 LMO1P25800 156 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 BPIFB3P59826 476 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 IL13RA1P78552 427 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 COL10A1Q03692 680 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 Q6P435 159 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 Q6YL49 198 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 CD177Q8N6Q3 437 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 ASCC1Q8N9N2 400 aaKnown RBP13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 NEK7Q8TDX7 302 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 CREB3L1Q96BA8 519 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 RAB3CQ96E17 227 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 SNX22Q96L94 193 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms