RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 CCL28Q9NRJ3 127 aa12.25□□□□□ -0.45
RAPGEF3-205ENST00000449771 COL18A1P39060 1754 aa12.25□□□□□ -0.45
RAPGEF3-205ENST00000449771 SYNGR2O43760 224 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 GFRA3O60609 400 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 G6PCP35575 357 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 MVDP53602 400 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 LINC00596Q86U02 117 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 SIRT7Q9NRC8 400 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 RNF122Q9H9V4 155 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 FBXL17Q9UF56 701 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 ERVH48-1M5A8F1 160 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 HLA-GP17693 338 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 PSG5Q15238 335 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 C10orf113Q5VZT2 155 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF501Q96CX3 271 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 FOXS1O43638 330 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 VWA1Q6PCB0 445 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 OR4P4Q8NGL7 312 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 RPS4Y2Q8TD47 263 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 TRAV39A0A0B4J263 110 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 CLDN34H7C241 214 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 OR8I2Q8N0Y5 310 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 DIRC2Q96SL1 478 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 SLC35B3Q9H1N7 401 aa12.24□□□□□ -0.45
RAPGEF3-205ENST00000449771 OR10J1P30954 320 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 CCL8P80075 99 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 MPV17LQ2QL34 196 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 FDX2Q6P4F2 183 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 OR4X1Q8NH49 305 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 DTX4Q9Y2E6 619 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 CELA2AP08217 269 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 HOXD4P09016 255 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 FAM219AQ8IW50 185 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 SLC26A10Q8NG04 563 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF385AQ96PM9 386 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF552Q9H707 407 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 OGG1O15527 345 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 RNF224P0DH78 156 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 CD40P25942 277 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 LOXL3P58215 753 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 ERVFRD-1P60508 538 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 COL5A1-AS1Q5SY13 56 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 TMEM116Q8NCL8 245 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 DDA1Q9BW61 102 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 CHODLQ9H9P2 273 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 BMPR1BO00238 502 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF154Q13106 437 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 MANBALQ9NQG1 85 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 HMSDA8MTL9 139 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 SYNGR1O43759 233 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 CHST1O43916 411 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 AREGP15514 252 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 VDAC1P21796 283 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 P2RY1P47900 373 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 SULT1A2P50226 295 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 RPL31P62899 125 aaKnown RBP12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 IFITM2Q01629 132 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 TMEM52Q8NDY8 209 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 PERPQ96FX8 193 aa12.23□□□□□ -0.45
RAPGEF3-205ENST00000449771 EIF3GO75821 320 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 LRRC3BQ96PB8 259 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 RPL36A-HNRNPH2H7BZ11 118 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 SP9P0CG40 484 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 GABRA6Q16445 453 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 EIF4E3Q8N5X7 224 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 NFAM1Q8NET5 270 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ADAP1O75689 374 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 PPYP01298 95 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 TEX30Q5JUR7 227 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 C19orf48Q6RUI8 117 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 CFHR5Q9BXR6 569 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ADAM11O75078 769 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 HPXP02790 462 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 HIST1H1EP10412 219 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 PRDX2P32119 198 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ACAA2P42765 397 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 PLPPR5Q32ZL2 321 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 NSUN5P2Q63ZY6 315 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ZNF426Q9BUY5 554 aa12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 ELF5Q9UKW6 265 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-205ENST00000449771 FAM87AP0C7U9 286 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms