RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 OR11A1Q9GZK7 315 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 MAP1LC3BQ9GZQ8 125 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 POLR2J3Q9H1A7 115 aaKnown RBP3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 VCX2Q9H322 139 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 BANF2Q9H503 90 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZDHHC11Q9H8X9 412 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 MRPL16Q9NX20 251 aaKnown RBP3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF586Q9NXT0 402 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 TVP23BQ9NYZ1 205 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 C1RLQ9NZP8 487 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 LRIT1Q9P2V4 623 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 ERG28Q9UKR5 140 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 SLC7A7Q9UM01 511 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 SCML2Q9UQR0 700 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 VSIG4Q9Y279 399 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 BPTFQ12830 3046 aa3.09□□□□□ -1.91
HMGB3P8-201ENST00000449709 COL4A2P08572 1712 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 LTBP1Q14766 1721 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PLXNA2O75051 1894 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 MYO16Q9Y6X6 1858 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 LOC102723996A0A087X1L8 192 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PSMB11A5LHX3 300 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 HELTA6NFD8 242 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ARL5CA6NH57 179 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 B4DGG1 531 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 HHLA1C9JL84 531 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SIRPB1O00241 398 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SLC17A3O00476 420 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 RRHO14718 337 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 HS3ST1O14792 307 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SIVA1O15304 175 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 NKX2-2O95096 273 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SOX14O95416 240 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM50AO95807 157 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TGFAP01135 160 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 HLA-AP01891 365 aaKnown RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 EDN1P05305 212 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ERGP11308 486 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 MMP9P14780 707 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF708P17019 499 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 AMD1P17707 334 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SRP14P37108 136 aaKnown RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ID1P41134 155 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 NSG1P42857 185 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TSFMP43897 325 aaKnown RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 GYG1P46976 350 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 NPBWR2P48146 333 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 REG1BP48304 166 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 THBS3P49746 956 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 STC1P52823 247 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PIGPP57054 158 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 CLDN2P57739 230 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 MLF1P58340 268 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TAS2R31P59538 309 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 S100A10P60903 97 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 RND3P61587 244 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 RHOBP62745 196 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 HIST1H1AQ02539 215 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF85Q03923 595 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM267Q0VDI3 215 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 Q0VG73 95 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PMPCAQ10713 525 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 GAGE5Q13069 117 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 GAGE6Q13070 117 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PPP1R1AQ13522 171 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 IGFBP7Q16270 282 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 GABRA6Q16445 453 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 DCST2Q5T1A1 773 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PLCXD3Q63HM9 321 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 WDR25Q64LD2 544 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF776Q68DI1 518 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SBSNQ6UWP8 590 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 DPPA3Q6W0C5 159 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF66Q6ZN08 573 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 Q6ZVH6 145 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SMIM5Q71RC9 77 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 Q7L0L9 218 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 LRRC70Q7Z2Q7 622 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 RD3Q7Z3Z2 195 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PIP4P1Q86T03 277 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 WDR5BQ86VZ2 330 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 DOLPP1Q86YN1 238 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 NPWQ8N729 165 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR2T33Q8NG76 320 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR4D11Q8NGI4 311 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR5A1Q8NGJ0 315 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR2Y1Q8NGV0 311 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR4F5Q8NH21 305 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 CLDND2Q8NHS1 167 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 ZNF563Q8TA94 476 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 SYNPRQ8TBG9 265 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 NEIL2Q969S2 332 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 PTH2Q96A98 100 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 TMEM45BQ96B21 275 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 RBMXL1Q96E39 390 aaKnown RBP3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 OR10C1Q96KK4 312 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 DGAT2Q96PD7 388 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 DERL3Q96Q80 235 aa3.08□□□□□ -1.92
HMGB3P8-201ENST00000449709 MYADMQ96S97 322 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms