RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TUBG1P23258 451 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 CD34P28906 385 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 GLP1RP43220 463 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TAS2R60P59551 318 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ACTBP60709 375 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ACTG1P63261 375 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF525Q8N782 197 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 OR14K1Q8NGZ2 314 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 TUBG2Q9NRH3 451 aa8.33□□□□□ -1.08
CCDC171-203ENST00000449575 HIVEP1P15822 2718 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 LOC107986453A0A1B0GWG9 222 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 C3orf80F5H4A9 247 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 CDC14BO60729 498 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 IFNA10P01566 189 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 CD74P04233 296 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 HLA-GP17693 338 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 COL8A2P25067 703 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 CAV2P51636 162 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 CD81P60033 236 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 SSX2Q16385 188 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 ANGPTL5Q86XS5 388 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 OR5AP2Q8NGF4 316 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 OR4A4PQ8NGN8 299 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 NINJ1Q92982 152 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 RAB3CQ96E17 227 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MALSU1Q96EH3 234 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MS4A5Q9H3V2 200 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MOB1AQ9H8S9 216 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF281Q9Y2X9 895 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 KPTNQ9Y664 436 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 ARHGAP32A7KAX9 2087 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MFNGO00587 321 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 SLC31A2O15432 143 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 MUC1P15941 1255 aaPredicted RBP8.32□□□□□ -1.08
CCDC171-203ENST00000449575 C9orf152Q5JTZ5 239 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 RPS4Y2Q8TD47 263 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 GFI1Q99684 422 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 RGCCQ9H4X1 137 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 RHOFQ9HBH0 211 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
CCDC171-203ENST00000449575 LOC100289279A0A1B0GTE1 492 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF850A8MQ14 1090 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 RNASEK-C17orf49H0YIS7 233 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 SYT7O43581 403 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 DHRS3O75911 302 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 IFNA17P01571 189 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 SFTA3P0C7M3 94 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 CCL1P22362 96 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 CPT2P23786 658 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 RBP2P50120 134 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 TAS2R19P59542 299 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 SPCS3P61009 180 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 EIF5AP63241 154 aaKnown RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 STEAP1BQ6NZ63 245 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 NUDCD2Q8WVJ2 157 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 ITLN1Q8WWA0 313 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 PIGCQ92535 297 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 ADAT3Q96EY9 351 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 OR2V2Q96R30 315 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 BEX4Q9NWD9 120 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 V9GYS6 101 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 DOCK11Q5JSL3 2073 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 A0A1B0GWJ7 208 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 LOC390937A0A1W2PQ73 354 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 PAX1P15863 534 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 NQO2P16083 231 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 S100A2P29034 98 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 PRSS3P35030 304 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 PRAMEF6Q5VXH4 476 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF676Q8N7Q3 588 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 SEMA6DQ8NFY4 1073 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 OR13G1Q8NGZ3 307 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 OR5AK2Q8NH90 309 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 HPSE2Q8WWQ2 592 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 CLCC1Q96S66 551 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 RAB1BQ9H0U4 201 aa8.31□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF230Q9UIE0 474 aaPredicted RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 NOP16Q9Y3C1 178 aaKnown RBP8.31□□□□□ -1.08
CCDC171-203ENST00000449575 TLN2Q9Y4G6 2542 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-203ENST00000449575 PIN1P1O15428 100 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 PTHLHP12272 177 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 RAB5AP20339 215 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 EFNA4P52798 201 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms