RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 VHLP40337 213 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 GLP1RP43220 463 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 MAP2K4P45985 399 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 LOXL3P58215 753 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 BLCAPP62952 87 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 QRFPP83859 136 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 TPTE2P1Q5T6R2 138 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 AWAT2Q6E213 333 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 CFHR4Q92496 578 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 GFI1Q99684 422 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 PITPNC1Q9UKF7 332 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 RAB26Q9ULW5 256 aa11.28□□□□□ -0.6
RTFDC1-204ENST00000449062 TMEM30CPA0ZSE6 113 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 TOR1AO14656 332 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 SLC22A1O15245 554 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 ORC5O43913 435 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 FUT3P21217 361 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 CD24P25063 80 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 NFYBP25208 207 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 RPS25P62851 125 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 RBM48Q5RL73 367 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 TREML4Q6UXN2 200 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 CREB3L1Q96BA8 519 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 MGLLQ99685 303 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 SELENOIQ9C0D9 397 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 MMP28Q9H239 520 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 TCF7L1Q9HCS4 588 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 ABCB10Q9NRK6 738 aa11.27□□□□□ -0.61
RTFDC1-204ENST00000449062 OOSP1A8MZH6 123 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 F2RL2O00254 374 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 CRTAPO75718 401 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 IGHV3-7P01780 117 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 AMY1AP04745 511 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 AMY2AP04746 511 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 HABP2Q14520 560 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 OR10K2Q6IF99 312 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 CCDC107Q8WV48 283 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 UFD1Q92890 307 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 CNBD2Q96M20 576 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 OCSTAMPQ9BR26 566 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
RTFDC1-204ENST00000449062 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 MCRIP1C9JLW8 97 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 CA11O75493 328 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 UBBP0CG47 229 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 HSMCR30P0CW71 290 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 BRS3P32247 399 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 CEACAM3P40198 252 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 FABP5Q01469 135 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 UNC119Q13432 240 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 RBM39Q14498 530 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 SSX1Q16384 188 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 GLT8D1Q68CQ7 371 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 THNSL2Q86YJ6 484 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 C8orf31Q8N9H6 132 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 DTX3Q8N9I9 347 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 ARL11Q969Q4 196 aa11.25□□□□□ -0.61
RTFDC1-204ENST00000449062 TIMM23O14925 209 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 PDCD6O75340 191 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 RCC1P18754 421 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 CHATP28329 748 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 HTR2CP28335 458 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 RPS27AP62979 156 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 EMX1Q04741 257 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 TRAM1Q15629 374 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 TBCEQ15813 527 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 LTC4SQ16873 150 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 SYT6Q5T7P8 510 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 ST6GALNAC6Q969X2 333 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 FAM46BQ96A09 425 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 TM2D1Q9BX74 207 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 CCDC90BQ9GZT6 254 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 LIN7BQ9HAP6 207 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-204ENST00000449062 GFOD1Q9NXC2 390 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms