RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	SPINK2	P20155	84 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	CA6	P23280	308 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	F2R	P25116	425 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	ATP6V0C	P27449	155 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	VAMP2	P63027	116 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	OR2T2	Q6IF00	324 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	MDP1	Q86V88	176 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	C15orf54	Q8N8G6	183 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	LFNG	Q8NES3	379 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	FAM213B	Q8TBF2	198 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	WDYHV1	Q96HA8	205 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058	LOXL4	Q96JB6	756 aa		14.41	□□□□□ -0.1
TOM1-210	ENST00000449058		J3QT63	122 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	RHBDL1	O75783	438 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	WNT2	P09544	360 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	PPP1CC	P36873	323 aa	Known RBP	14.4	□□□□□ -0.1
TOM1-210	ENST00000449058		Q6P435	159 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	OR10J5	Q8NHC4	309 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	NANOS1	Q8WY41	292 aa	Known RBP	14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	PBDC1	Q9BVG4	233 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	OR51B6	Q9H340	312 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	TAAR3P	Q9P1P4	343 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	RNF115	Q9Y4L5	304 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	UMAD1	C9J7I0	102 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	NPIPB11	E5RHQ5	1161 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	C3orf80	F5H4A9	247 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	TNFSF12	O43508	249 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	OMG	P23515	440 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	HOXA1	P49639	335 aa	Predicted RBP	14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	BAX	Q07812	192 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	OR2G3	Q8NGZ4	309 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	RFNG	Q9Y644	331 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	MUC3A	Q02505	3323 aa		14.4	□□□□□ -0.1
TOM1-210	ENST00000449058	DOCK7	Q96N67	2140 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	CD46	P15529	392 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	AWAT1	Q58HT5	328 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	OR5C1	Q8NGR4	320 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	CLCC1	Q96S66	551 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	DEFB127	Q9H1M4	99 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	BIN3	Q9NQY0	253 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	SPRR3	Q9UBC9	169 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	MED19	A0JLT2	244 aa	Predicted RBP	14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	DEGS1	O15121	323 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	TNFSF15	O95150	251 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	PAX9	P55771	341 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	IL22RA1	Q8N6P7	574 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	OR8G5	Q8NG78	346 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	SLC35B3	Q9H1N7	401 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	RPS10P5	Q9NQ39	176 aa		14.39	□□□□□ -0.11
TOM1-210	ENST00000449058	C7orf77	A4D0Y5	90 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	ARGFX	A6NJG6	315 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058		J3QW42	95 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	CHST1	O43916	411 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	SLC25A6	P12236	298 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	S100G	P29377	79 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	DYNLT3	P51808	116 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	IGFBP7	Q16270	282 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	RNFT1	Q5M7Z0	435 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	SPATA46	Q5T0L3	261 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	DHRS13	Q6UX07	377 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	SNIP1	Q8TAD8	396 aa	Known RBP	14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	TREM2	Q9NZC2	230 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	ERRFI1	Q9UJM3	462 aa	Predicted RBP	14.38	□□□□□ -0.11
TOM1-210	ENST00000449058		A0A0G2JRQ6	117 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	HSPA12A	O43301	675 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	CST7	O76096	145 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	FOSL1	P15407	271 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	MDH2	P40926	338 aa	Known RBP	14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	AKR1C3	P42330	323 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	TGIF1	Q15583	401 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	AKIRIN2	Q53H80	203 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	SP5	Q6BEB4	398 aa	Predicted RBP	14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	WDR86	Q86TI4	376 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	C14orf79	Q96F83	325 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	RTL8A	Q9BWD3	113 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	SMDT1	Q9H4I9	107 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	TUBA4B	Q9H853	241 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	FBXO7	Q9Y3I1	522 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	MED12L	Q86YW9	2145 aa		14.38	□□□□□ -0.11
TOM1-210	ENST00000449058	TRGV5	A0A0B4J1U4	118 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	PIGBOS1	A0A0B4J2F0	54 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058		A0A1B0GU03	582 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF44	P15621	663 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ZNF14	P17017	642 aa	Predicted RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	ERVK11-1	P61568	191 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	TBC1D28	Q2M2D7	210 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	SPSB3	Q6PJ21	355 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	LRP5L	A4QPB2	252 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058		M0R296	226 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	IGLV2-14	P01704	120 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	CEACAM1	P13688	526 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	EPHA1	P21709	976 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	OR8G1	Q15617	311 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	HES3	Q5TGS1	186 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	MOB1B	Q7L9L4	216 aa		14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	MYPOP	Q86VE0	399 aa	Predicted RBP	14.37	□□□□□ -0.11
TOM1-210	ENST00000449058	OR10V1	Q8NGI7	309 aa		14.37	□□□□□ -0.11

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