RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 LIMS3P0CW19 117 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 LIMS4P0CW20 117 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 MYCNOSP40205 109 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 RBM11P57052 281 aaKnown RBP9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 UNQ9370/PRO34162Q6UXP9 181 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 LINC00596Q86U02 117 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 LINC00311Q8N616 119 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 OR52M1Q8NGK5 317 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 ARL11Q969Q4 196 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 S100A13Q99584 98 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 SLC29A1Q99808 456 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 ZMAT5Q9UDW3 170 aaKnown RBP9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 KMT2CQ8NEZ4 4911 aaKnown RBP9.18□□□□□ -0.94
UBE2D4-204ENST00000440899 A0A1W2PPE3 182 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 TMEM30CPA0ZSE6 113 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 NCBP2LA6PVI3 153 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 GEMIN2O14893 280 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF780AO75290 641 aaPredicted RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 DCKP27707 260 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF93P35789 620 aaPredicted RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 PPP3R1P63098 170 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 DCTN2Q13561 401 aaKnown RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 MPV17LQ2QL34 196 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 DDI2Q5TDH0 399 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 TMPRSS11AQ6ZMR5 421 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 TGIF2LXQ8IUE1 241 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 IZUMO1Q8IYV9 350 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 STPG2Q8N412 459 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 C8orf31Q8N9H6 132 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 OR2T10Q8NGZ9 312 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 P2RX4Q99571 388 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
UBE2D4-204ENST00000440899 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 C15orf65H3BRN8 121 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 AP4M1O00189 453 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 OGG1O15527 345 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 ORC5O43913 435 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 MT-ND4P03905 459 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 GTF2F2P13984 249 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 IL3RAP26951 378 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 CD1BP29016 333 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 BDKRB2P30411 391 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 REG1BP48304 166 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 ETV1P50549 477 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 GP2P55259 537 aaKnown RBP9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 CD69Q07108 199 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 ATAD3CQ5T2N8 411 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 C11orf87Q6NUJ2 197 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 TEX38Q6PEX7 206 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF497Q6ZNH5 498 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 Q8N6K4 173 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 NEK7Q8TDX7 302 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 GON7Q9BXV9 100 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 ABCG5Q9H222 651 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 LIN7CQ9NUP9 197 aaKnown RBP9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 GFOD1Q9NXC2 390 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 BABAM2Q9NXR7 383 aa9.16□□□□□ -0.94
UBE2D4-204ENST00000440899 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 H0YHG0 523 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 CCL24O00175 119 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SDCBPO00560 298 aaPredicted RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SPINT2O43291 252 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 WBP4O75554 376 aaKnown RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SERPINA2P20848 420 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 GPR12P47775 334 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 RIPK1Q13546 671 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 GPR176Q14439 515 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 Q3ZCU0 254 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SLC22A6Q4U2R8 563 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 OR2G6Q5TZ20 316 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 STX19Q8N4C7 294 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 Q8N9W7 124 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 UBALD1Q8TB05 177 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 CCDC107Q8WV48 283 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 APH1BQ8WW43 257 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 RTN4IP1Q8WWV3 396 aaPredicted RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 ST6GALNAC6Q969X2 333 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SPACA1Q9HBV2 294 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 RAB9BQ9NP90 201 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 PLSCR3Q9NRY6 295 aa9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 SIRT4Q9Y6E7 314 aaPredicted RBP9.15□□□□□ -0.94
UBE2D4-204ENST00000440899 IRGMA1A4Y4 181 aa9.14□□□□□ -0.95
UBE2D4-204ENST00000440899 AIPO00170 330 aa9.14□□□□□ -0.95
UBE2D4-204ENST00000440899 TXNL1O43396 289 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms