RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 DMRTB1Q96MA1 342 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 GAFA1Q96PS6 74 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 DCTN5Q9BTE1 182 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 GPN1Q9HCN4 374 aaPredicted RBP15.93■□□□□ 0.14
SNX17-203ENST00000440760 SLC23A1Q9UHI7 598 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 UTP20O75691 2785 aaKnown RBP15.93■□□□□ 0.14
SNX17-203ENST00000440760 IGHV1-69-2A0A0G2JMI3 117 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 CEACAM18A8MTB9 384 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 TEX36Q5VZQ5 186 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 SLC35E4Q6ICL7 350 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 C11orf71Q6IPW1 123 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 DHRS11Q6UWP2 260 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 TMEM230Q96A57 120 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 RTBDNQ9BSG5 229 aaPredicted RBP15.93■□□□□ 0.14
SNX17-203ENST00000440760 UBTD1Q9HAC8 227 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 CBLN4Q9NTU7 201 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 MBNL3Q9NUK0 354 aaKnown RBP15.93■□□□□ 0.14
SNX17-203ENST00000440760 OR1A1Q9P1Q5 309 aa15.93■□□□□ 0.14
SNX17-203ENST00000440760 H7C1Q1 480 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 LY6HO94772 140 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 HLA-AP01891 365 aaKnown RBP15.92■□□□□ 0.14
SNX17-203ENST00000440760 DHRS2Q13268 280 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 FGFRL1Q8N441 504 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 TMEM185AQ8NFB2 350 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 MRGPRDQ8TDS7 321 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 TAF9BQ9HBM6 251 aa15.92■□□□□ 0.14
SNX17-203ENST00000440760 VAMP1P23763 118 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 PPOXP50336 477 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 CD276Q5ZPR3 534 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 UXS1Q8NBZ7 420 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 OR4A4PQ8NGN8 299 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 OR13A1Q8NGR1 328 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 SNX22Q96L94 193 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 ALX4Q9H161 411 aaPredicted RBP15.91■□□□□ 0.14
SNX17-203ENST00000440760 FAM208BQ5VWN6 2430 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 LRRK2Q5S007 2527 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 A6NNC1 897 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 SNRPGP15A8MWD9 76 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 K7N7A8 449 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 PPYP01298 95 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 TK1P04183 234 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 DANCRP0C864 163 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 KCNJ3P48549 501 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 SRSF1Q07955 248 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNX17-203ENST00000440760 HMGN3Q15651 99 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 C1orf87Q8N0U7 546 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 ZNF431Q8TF32 576 aaPredicted RBP15.91■□□□□ 0.14
SNX17-203ENST00000440760 MED30Q96HR3 178 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 CABLES2Q9BTV7 478 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 MYOZ1Q9NP98 299 aaPredicted RBP15.91■□□□□ 0.14
SNX17-203ENST00000440760 LAMP3Q9UQV4 416 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 AKAP6Q13023 2319 aa15.91■□□□□ 0.14
SNX17-203ENST00000440760 PPIAL4EA0A075B759 164 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 C12orf77C9JDV5 145 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 PPIAL4DF5H284 164 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 LGALS8O00214 317 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 PPIAL4FP0DN26 164 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 MUC1P15941 1255 aaPredicted RBP15.9■□□□□ 0.14
SNX17-203ENST00000440760 ZBTB25P24278 435 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 SSTR5P35346 364 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 EDDM3BP56851 147 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 HERV-K104P61576 105 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 C2orf68Q2NKX9 166 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 ZNF561Q8N587 486 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 OR1L1Q8NH94 360 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 MOB3AQ96BX8 217 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 SDSLQ96GA7 329 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 PPIAL4AQ9Y536 164 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 DSCAML1Q8TD84 2053 aa15.9■□□□□ 0.14
SNX17-203ENST00000440760 MGST3O14880 152 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 ZNF728P0DKX0 622 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 SULT1A3P0DMM9 295 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 SULT1A4P0DMN0 295 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 FAM53AQ6NSI3 398 aaPredicted RBP15.89■□□□□ 0.13
SNX17-203ENST00000440760 ZNF788Q6ZQV5 615 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 CASTOR1Q8WTX7 329 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 ZNF665Q9H7R5 613 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 SEBOXQ9HB31 216 aaPredicted RBP15.89■□□□□ 0.13
SNX17-203ENST00000440760 PRR13Q9NZ81 148 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 TRBV6-7A0A0A0MS04 114 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 IGKV1D-13A0A0B4J2D9 117 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 C9orf170A2RU37 121 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 SMLR1H3BR10 107 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 TMPRSS2O15393 492 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 IGKV1-13P0DP09 117 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 COL8A2P25067 703 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 SURF2Q15527 256 aaPredicted RBP15.89■□□□□ 0.13
SNX17-203ENST00000440760 KCNJ8Q15842 424 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 LIN54Q6MZP7 749 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 LYG2Q86SG7 212 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 PARP12Q9H0J9 701 aaKnown RBP15.89■□□□□ 0.13
SNX17-203ENST00000440760 MGAT4CQ9UBM8 478 aa15.89■□□□□ 0.13
SNX17-203ENST00000440760 C14orf166Q9Y224 244 aaKnown RBP15.89■□□□□ 0.13
SNX17-203ENST00000440760 USF3Q68DE3 2245 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 TRAV38-1A0A0B4J264 116 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 ODAMA1E959 279 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 FAM172BPA6NC97 362 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 HFEQ30201 348 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 DTX2Q86UW9 622 aa15.88■□□□□ 0.13
SNX17-203ENST00000440760 LDLRAD3Q86YD5 345 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms