RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 DCAF12L2Q5VW00 463 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 FADS6Q8N9I5 356 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 MRGPRFQ96AM1 343 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 C12orf57Q99622 126 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 NUDT19A8MXV4 375 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 SLC25A4P12235 298 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 RPS2P15880 293 aaKnown RBP10.63□□□□□ -0.71
TCOF1-205ENST00000439160 ZP3P21754 424 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 THBS3P49746 956 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 UCNP55089 124 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 SSTP61278 116 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 FGF12P61328 243 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 TRAF4Q9BUZ4 470 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-205ENST00000439160 RNF122Q9H9V4 155 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 NCBP2LA6PVI3 153 aaKnown RBP10.63□□□□□ -0.71
TCOF1-205ENST00000439160 NPIPB7O75200 414 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 RD3LP0DJH9 198 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 PPP1CCP36873 323 aaKnown RBP10.63□□□□□ -0.71
TCOF1-205ENST00000439160 RPL11P62913 178 aaKnown RBP10.63□□□□□ -0.71
TCOF1-205ENST00000439160 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 MS4A5Q9H3V2 200 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 CHST1O43916 411 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 CD59P13987 128 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 ARL3P36405 182 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 IL13RA2Q14627 380 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM54Q969K7 222 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 RAB1BQ9H0U4 201 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 C19orf12Q9NSK7 152 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 MTCH1Q9NZJ7 389 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 DOPEY2Q9Y3R5 2298 aa10.63□□□□□ -0.71
TCOF1-205ENST00000439160 NKX2-6A6NCS4 301 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 PRSS44E7EML9 344 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 KCNAB3O43448 404 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 MBP02144 154 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 NPBWR2P48146 333 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
TCOF1-205ENST00000439160 NTNG2Q96CW9 530 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 MED13LQ71F56 2210 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM210A6NLX4 147 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF705GA8MUZ8 300 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-205ENST00000439160 CA11O75493 328 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 ADH4P08319 380 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 SCTP09683 121 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 HNF1AP20823 631 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 TNFSF10P50591 281 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 RAB1CQ92928 201 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 AKR1E2Q96JD6 320 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 LRFN3Q9BTN0 628 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 TPPP3Q9BW30 176 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 A0A1W2PPE3 182 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 H7BYZ3 331 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 ST8SIA5O15466 376 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 ETV3LQ6ZN32 361 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 SMIM7Q9BQ49 75 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-205ENST00000439160 GAB2Q9UQC2 676 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 PRR32B1ATL7 298 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 SYNGR2O43760 224 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 CFDP00746 253 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-205ENST00000439160 PRDX2P32119 198 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 NDUFA6P56556 154 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 CLEC12BQ2HXU8 276 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 VAX1Q5SQQ9 334 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 NR2C2APQ86WQ0 139 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 BPIFCQ8NFQ6 507 aa10.62□□□□□ -0.71
TCOF1-205ENST00000439160 PCNX2A6NKB5 2137 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 A0A0G2JK05 382 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 TRIM77I1YAP6 450 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 CEACAM1P13688 526 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-205ENST00000439160 OR11H4Q8NGC9 324 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 OR4A4PQ8NGN8 299 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 NMES1Q9C002 83 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 CDX4O14627 284 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-205ENST00000439160 OR10J4P0C629 311 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 TAS2R45P59539 299 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 COL10A1Q03692 680 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 GABRA6Q16445 453 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 Q5BKY6 102 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 C1QL2Q7Z5L3 287 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 KLF14Q8TD94 323 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-205ENST00000439160 SAMD10Q9BYL1 202 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 PRDM14Q9GZV8 571 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 CUL9Q8IWT3 2517 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 SIGLEC5O15389 551 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
TCOF1-205ENST00000439160 S100A7P31151 101 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 PDZD11Q5EBL8 140 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 AQP3Q92482 292 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 TCEAL7Q9BRU2 100 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF665Q9H7R5 613 aa10.61□□□□□ -0.71
TCOF1-205ENST00000439160 WIPI2Q9Y4P8 454 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms