RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RILPQ96NA2 401 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 KCNS3Q9BQ31 491 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 PARP12Q9H0J9 701 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SAV1Q9H4B6 383 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM185BQ9H7F4 350 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 MRPS30Q9NP92 439 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CCDC59Q9P031 241 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OPN4Q9UHM6 478 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM14AQ9Y6G1 99 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 NCKAP5O14513 1909 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 NUP214P35658 2090 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 FRAS1Q86XX4 4008 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 IGLV1-50A0A075B6I6 118 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 A0A075B6Q4 140 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 TRAV40A0A0B4J280 105 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 C7orf66A4D0T2 115 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 LYRM9A8MSI8 78 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF705GA8MUZ8 300 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 H0YC42 278 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 CDH16O75309 829 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 AGTP01019 485 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR12D1P0DN82 309 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 MYL2P10916 166 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 MUC1P15941 1255 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF708P17019 499 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 KIR3DL2P43630 455 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 PRLHRP49683 370 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 RAB7AP51149 207 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 BTG2P78543 158 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 C5orf47Q569G3 176 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF470Q6ECI4 717 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 ANGPTL8Q6UXH0 198 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 NDUFA11Q86Y39 141 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 CALHM1Q8IU99 346 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 SBSPONQ8IVN8 264 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 FAM71AQ8IYT1 594 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 RIBC1Q8N443 379 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR5T3Q8NGG3 340 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 TSEN15Q8WW01 171 aaKnown RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 APH1BQ8WW43 257 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 RAB8BQ92930 207 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM230Q96A57 120 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 FLYWCH2Q96CP2 140 aaKnown RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR8D2Q9GZM6 311 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 C16orf95Q9H693 158 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 RNF122Q9H9V4 155 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 DKKL1Q9UK85 242 aa1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 SOX21Q9Y651 276 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P12-201ENST00000438745 COLCA2A8K830 154 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 ATP6V1G2-DDX39BF2Z307 99 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 hCG_2039718K7EN88 272 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 NDUFAB1O14561 156 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 DNALI1O14645 258 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 LIN7AO14910 233 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CHST10O43529 356 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CHST1O43916 411 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 LYZL6O75951 148 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 KRT14P02533 472 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 SERPINE2P07093 398 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 LINC00869P0C866 280 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 RAB3AP20336 220 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 RPA3P35244 121 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 HCAR3P49019 387 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CCNG1P51959 295 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 PRRX1P54821 245 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CLDN18P56856 261 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM33P57088 247 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 PPP1CBP62140 327 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 GBE1Q04446 702 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 MERTKQ12866 999 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 DGCR6Q14129 220 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 TRAM2Q15035 370 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 LY6EQ16553 131 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF791Q3KP31 576 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 TIMM23BQ5SRD1 257 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 AVPI1Q5T686 147 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 BRD3OSQ6XYD6 125 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 EIF3MQ7L2H7 374 aaKnown RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 SNX20Q7Z614 316 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 WDR86Q86TI4 376 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZCCHC24Q8N2G6 241 aaKnown RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 SPERTQ8NA61 448 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CHST4Q8NCG5 386 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM35BQ8NCS4 154 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 WFDC9Q8NEX5 89 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR4K5Q8NGD3 323 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR8K3Q8NH51 312 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR51E1Q8TCB6 317 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 C15orf40Q8WUR7 153 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 MRGPRFQ96AM1 343 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 MCUR1Q96AQ8 359 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 L3HYPDHQ96EM0 354 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF317Q96PQ6 595 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 CHP1Q99653 195 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 SPIN2AQ99865 258 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 SPIN2BQ9BPZ2 258 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 C1QTNF6Q9BXI9 259 aa1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 DHX35Q9H5Z1 703 aaKnown RBP1.86□□□□□ -2.11
HMGB3P12-201ENST00000438745 GEMIN7Q9H840 131 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms