RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LILRA1O75019 489 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 ZNF616Q08AN1 781 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 GUSBP1Q15486 140 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 ZDHHC23Q8IYP9 409 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 APOBEC3DQ96AK3 386 aaPredicted RBP11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 CNTNAP3Q9BZ76 1288 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
PTCHD3-201ENST00000438700 RAB5AP20339 215 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 AADACP22760 399 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 LYZL2Q7Z4W2 148 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 EXTL1Q92935 676 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 SCRT1Q9BWW7 348 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 PARP11Q9NR21 331 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 METTL1Q9UBP6 276 aaKnown RBP11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 YIF1AO95070 293 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 DIRAS3O95661 229 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 COX5BP10606 129 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 GLP1RP43220 463 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 TMEM187Q14656 261 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 IGFBP7Q16270 282 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 POM121L2Q96KW2 1035 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 MTCH1Q9NZJ7 389 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 MSRB2Q9Y3D2 182 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 RFNGQ9Y644 331 aa11.85□□□□□ -0.51
PTCHD3-201ENST00000438700 K7EPK0 472 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 CST4P01036 141 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 IGHV1-2P23083 117 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 HERV-K104P61576 105 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 PLP2Q04941 152 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 CEACAM21Q3KPI0 293 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 RNF212Q495C1 297 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 SPATA46Q5T0L3 261 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 VWA1Q6PCB0 445 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 FAM71E2Q8N5Q1 922 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 MOB3AQ96BX8 217 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 ABHD17AQ96GS6 310 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 ZNF488Q96MN9 340 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 DNAJB11Q9UBS4 358 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 FBXO7Q9Y3I1 522 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 SPTBN4Q9H254 2564 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 SYNGR1O43759 233 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 DEDDO75618 318 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 TSPAN15O95858 294 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 SNCAP37840 140 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 GUK1Q16774 197 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 TMEM211Q6ICI0 200 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 MDP1Q86V88 176 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
PTCHD3-201ENST00000438700 INTS1Q8N201 2190 aaKnown RBP11.83□□□□□ -0.51
PTCHD3-201ENST00000438700 CD300LBA8K4G0 201 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 PPIHO43447 177 aaKnown RBP11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 LYZL6O75951 148 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 LY86O95711 162 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 PPYP01298 95 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 OR13C7P0DN81 318 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 S100PP25815 95 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 PAX6P26367 422 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 WNT5AP41221 380 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 SULT1A1P50225 295 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 FOXF2Q12947 444 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 TSC22D1Q15714 1073 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 NANOS1Q8WY41 292 aaKnown RBP11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 TP53TG5Q9Y2B4 290 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 ATMQ13315 3056 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 ASCL1P50553 236 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 FGF12P61328 243 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 DPPA2Q7Z7J5 298 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 WFDC1Q9HC57 220 aa11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
PTCHD3-201ENST00000438700 A0A1W2PR80 420 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 TRAPPC2LH3BP13 241 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 CRYABP02511 175 aaKnown RBP11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 SCTP09683 121 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 APLNRP35414 380 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 TGFBR3Q03167 851 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 Q6ZT83 130 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 TP53RKQ96S44 253 aa11.82□□□□□ -0.52
PTCHD3-201ENST00000438700 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms