RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C1orf100Q5SVJ3 147 aa19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 RAB12Q6IQ22 244 aa19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 MMP28Q9H239 520 aa19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 ZNF696Q9H7X3 374 aa19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 AMMECR1Q9Y4X0 333 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF1-206ENST00000438647 A6NDX4 124 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 BUB1B-PAK6H3BSN5 160 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 MRPS14O60783 128 aaKnown RBP19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 CA11O75493 328 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 GLAP06280 429 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 BRS3P32247 399 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 SSTR5P35346 364 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 KIR2DS4P43632 304 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 CCDC144NLQ6NUI1 221 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 C11orf88Q6PI97 169 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 ZNF497Q6ZNH5 498 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 TMEM91Q6ZNR0 172 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 SLC16A12Q6ZSM3 486 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 RFESDQ8TAC1 157 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 FAM46BQ96A09 425 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 RAB9BQ9NP90 201 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 ETAA1Q9NY74 926 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 PEX16Q9Y5Y5 336 aa19.93■□□□□ 0.78
RAPGEF1-206ENST00000438647 TRRAPQ9Y4A5 3859 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 OOSP1A8MZH6 123 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 AIPO00170 330 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 CHST1O43916 411 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 MT-ND4P03905 459 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 FUT3P21217 361 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 HTR2CP28335 458 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 PRR31Q5SQ13 230 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 OR6M1Q8NGM8 313 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 OR2T6Q8NHC8 308 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 CITED1Q99966 193 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 ACOT13Q9NPJ3 140 aa19.92■□□□□ 0.78
RAPGEF1-206ENST00000438647 TRAV39A0A0B4J263 110 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 DENRO43583 198 aaKnown RBP19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 ORC5O43913 435 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 MPIG6BO95866 241 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 LTC4SQ16873 150 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 SVOPQ8N4V2 548 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 KCNG3Q8TAE7 436 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 ARL11Q969Q4 196 aa19.91■□□□□ 0.78
RAPGEF1-206ENST00000438647 J3QR06 171 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 SLC22A1O15245 554 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 PDCD6O75340 191 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 CD37P11049 281 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 MNDAP41218 407 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 RANBP1P43487 201 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 TPTE2P1Q5T6R2 138 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 CCBE1Q6UXH8 406 aaPredicted RBP19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 TMEM219Q86XT9 240 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 OR52M1Q8NGK5 317 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 CCDC107Q8WV48 283 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 TMEM59Q9BXS4 323 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 TRAPPC2LQ9UL33 140 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 PSG11Q9UQ72 335 aa19.9■□□□□ 0.78
RAPGEF1-206ENST00000438647 BPNT1O95861 308 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 VSIG8P0DPA2 414 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 JUNBP17275 347 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 CALRP27797 417 aaKnown RBP19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 SRSF4Q08170 494 aaKnown RBP19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 C6orf183Q5T699 404 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 TRAT1Q6PIZ9 186 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 GAPTQ8N292 157 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 RPEQ96AT9 228 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 YTHDF1Q9BYJ9 559 aaKnown RBP19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 PLGRKTQ9HBL7 147 aa19.89■□□□□ 0.77
RAPGEF1-206ENST00000438647 LY6LH3BQJ8 138 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 C15orf65H3BRN8 121 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 TIMM23O14925 209 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 PSMD7P51665 324 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 RPS27AP62979 156 aaKnown RBP19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 FABP5Q01469 135 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 EMX1Q04741 257 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 MADCAM1Q13477 382 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 TMEM30BQ3MIR4 351 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 SYT6Q5T7P8 510 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 C16orf82Q7Z2V1 217 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 OR10X1Q8NGY0 326 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 AKR1E2Q96JD6 320 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 NEDD4LQ96PU5 975 aa19.88■□□□□ 0.77
RAPGEF1-206ENST00000438647 NBEAL1Q6ZS30 2694 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 SPINT2O43291 252 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 GNG10P50151 68 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 EFNB2P52799 333 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 UTF1Q5T230 341 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 SIGIRRQ6IA17 410 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 OR10K2Q6IF99 312 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 CAPSLQ8WWF8 208 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 LEAP2Q969E1 77 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 TOMM40LQ969M1 308 aa19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 RRP15Q9Y3B9 282 aaKnown RBP19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 AK6Q9Y3D8 172 aaKnown RBP19.87■□□□□ 0.77
RAPGEF1-206ENST00000438647 SDCBPO00560 298 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF1-206ENST00000438647 SLC17A2O00624 439 aa19.86■□□□□ 0.77
RAPGEF1-206ENST00000438647 IGHV3-7P01780 117 aa19.86■□□□□ 0.77
RAPGEF1-206ENST00000438647 KRTAP10-3P60369 221 aa19.86■□□□□ 0.77
RAPGEF1-206ENST00000438647 NKAPLQ5M9Q1 402 aa19.86■□□□□ 0.77
RAPGEF1-206ENST00000438647 OR4K15Q8NH41 348 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms