RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LMO1P25800 156 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ID4P47928 161 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 PPT1P50897 306 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 UBE2NP61088 152 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 PPP1CBP62140 327 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 RPL23AP62750 156 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 TGIF1Q15583 401 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 FIP1L1Q6UN15 594 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 OR2G3Q8NGZ4 309 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 RDH5Q92781 318 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 WNT2BQ93097 391 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 LSM10Q969L4 123 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 ZNF488Q96MN9 340 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 EIF5A2Q9GZV4 153 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 BIN3Q9NQY0 253 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SPRR3Q9UBC9 169 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 TECTAO75443 2155 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ARGFXA6NJG6 315 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SH2D1BO14796 132 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SMPD2O60906 423 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ACAA1P09110 424 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 CEACAM1P13688 526 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 FOLR2P14207 255 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ZNF14P17017 642 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 CD200P41217 278 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 NOVA1P51513 510 aaKnown RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 RAB2AP61019 212 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 CXorf66Q5JRM2 361 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 INO80CQ6PI98 192 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 SUMF1Q8NBK3 374 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 FAM213BQ8TBF2 198 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 PLPPR1Q8TBJ4 325 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 RAB40CQ96S21 281 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SLC35B3Q9H1N7 401 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 TUBA4BQ9H853 241 aa8.87□□□□□ -0.99
CD44-210ENST00000434472 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
CD44-210ENST00000434472 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 RNF212BA8MTL3 300 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 IQCF6A8MYZ5 107 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 C9JQL5 133 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 ZNHIT1O43257 154 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 CHST1O43916 411 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 LILRA1O75019 489 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 CNOT4O95628 575 aaKnown RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 TUBG1P23258 451 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 DYNLT3P51808 116 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 ERVK11-1P61568 191 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 CLINT1Q14677 625 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 ZNF497Q6ZNH5 498 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 C17orf78Q8N4C9 275 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 RNASE11Q8TAA1 199 aaKnown RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 GPR146Q96CH1 333 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 ATP5SQ99766 215 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 SCRT1Q9BWW7 348 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 PARP12Q9H0J9 701 aaKnown RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 MAGT1Q9H0U3 335 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 OR51B6Q9H340 312 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 UNKLQ9H9P5 680 aaKnown RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 KCNJ16Q9NPI9 418 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 TUBG2Q9NRH3 451 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 WIPI2Q9Y4P8 454 aa8.86□□□□□ -0.99
CD44-210ENST00000434472 KLF2Q9Y5W3 355 aaPredicted RBP8.86□□□□□ -0.99
CD44-210ENST00000434472 PROB1E7EW31 1015 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 IGHG3P01860 377 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 HBE1P02100 147 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 PGA5P0DJD9 388 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 NFYBP25208 207 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 HOXA1P49639 335 aaPredicted RBP8.85□□□□□ -0.99
CD44-210ENST00000434472 RAB13P51153 203 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 C20orf204Q6ZNR8 217 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 C5orf24Q7Z6I8 188 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 STX12Q86Y82 276 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 SCCPDHQ8NBX0 429 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
CD44-210ENST00000434472 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
CD44-210ENST00000434472 TRAPPC2LQ9UL33 140 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 PRUNE2Q8WUY3 3088 aa8.85□□□□□ -0.99
CD44-210ENST00000434472 SIRPB1O00241 398 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 SLC33A1O00400 549 aaPredicted RBP8.84□□□□□ -0.99
CD44-210ENST00000434472 TNFSF12O43508 249 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RHBDL1O75783 438 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 NXPH2O95156 264 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 OR2H2O95918 312 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 IFNA5P01569 189 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 SULT1A1P50225 295 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 TNFSF10P50591 281 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RAB5BP61020 215 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 TLE4Q04727 773 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 ZNF146Q15072 292 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RHEBQ15382 184 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RNF212Q495C1 297 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 SPATA46Q5T0L3 261 aa8.84□□□□□ -0.99
CD44-210ENST00000434472 AKR1C8PQ5T2L2 129 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms