RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 C4orf17Q53FE4 359 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 FGF23Q9GZV9 251 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 SH3BGRL3Q9H299 93 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 PRO1933Q9H354 126 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OBP2BQ9NPH6 170 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 NECAP2Q9NVZ3 263 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OR2C1O95371 312 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OR8U8P0C7N1 319 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 CHATP28329 748 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 FUT6P51993 359 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 NHLH2Q02577 135 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 PPA1Q15181 289 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 ZDHHC23Q8IYP9 409 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 RAB18Q9NP72 206 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 RALYQ9UKM9 306 aaKnown RBP13.36□□□□□ -0.27
SCARF1-203ENST00000434376 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 OSGIN2Q9Y236 505 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 PCSK5Q92824 1860 aa13.36□□□□□ -0.27
SCARF1-203ENST00000434376 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-203ENST00000434376 HKR1P10072 659 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 LHFPL2Q6ZUX7 228 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 TOLLIPQ9H0E2 274 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 ANKRD30BLA7E2S9 258 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 RNF224P0DH78 156 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 CD37P11049 281 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 RNF212Q495C1 297 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 C10orf91Q5T1B1 145 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 ABLIM2Q6H8Q1 611 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 SMIM8Q96KF7 97 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 FER1L6-AS2Q96M78 137 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 CCL28Q9NRJ3 127 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
SCARF1-203ENST00000434376 AP4M1O00189 453 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 WDR1O75083 606 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 PDCD6O75340 191 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 HLA-GP17693 338 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FUT3P21217 361 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 HAGHQ16775 308 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 PNLIPRP3Q17RR3 467 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 TCEAL7Q9BRU2 100 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FAM234AQ9H0X4 552 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 ASH1LQ9NR48 2969 aaKnown RBP13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
SCARF1-203ENST00000434376 UBE2CO00762 179 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 CST4P01036 141 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
SCARF1-203ENST00000434376 VAX1Q5SQQ9 334 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 OR10D4PQ8NGN7 298 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 TP53RKQ96S44 253 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 SUCNR1Q9BXA5 334 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 C1orf123Q9NWV4 160 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 H0YL77 283 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF708P17019 499 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 PLA2G5P39877 138 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 SULT1A2P50226 295 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 RBM11P57052 281 aaKnown RBP13.34□□□□□ -0.27
SCARF1-203ENST00000434376 SOHLH1Q5JUK2 328 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FAHD2BQ6P2I3 314 aaPredicted RBP13.34□□□□□ -0.27
SCARF1-203ENST00000434376 Q6ZPA2 131 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 LURAP1LQ8IV03 231 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FAM89BQ8N5H3 189 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 ZNF383Q8NA42 475 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 FAHD2AQ96GK7 314 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 RARRES2Q99969 163 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
SCARF1-203ENST00000434376 LRBAP50851 2863 aa13.33□□□□□ -0.27
SCARF1-203ENST00000434376 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 WNT9BO14905 357 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 IFNA17P01571 189 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 HEXAP06865 529 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 WNT5AP41221 380 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 VWA1Q6PCB0 445 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 ZNF808Q8N4W9 903 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-203ENST00000434376 SUMF2Q8NBJ7 301 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 PRRX2Q99811 253 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 PARD6AQ9NPB6 346 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 KLF13Q9Y2Y9 288 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-203ENST00000434376 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 DBX1A6NMT0 343 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 DEFB108AA8MXU0 73 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 PPP1CCP36873 323 aaKnown RBP13.33□□□□□ -0.28
SCARF1-203ENST00000434376 GAPTQ8N292 157 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 CDH20Q9HBT6 801 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 SSSCA1O60232 199 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 JTBO76095 146 aa13.33□□□□□ -0.28
SCARF1-203ENST00000434376 CD5P06127 495 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms