RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
ACTB-205ENST00000432588 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
ACTB-205ENST00000432588 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
ACTB-205ENST00000432588 MOB3BQ86TA1 216 aa12.8□□□□□ -0.36
ACTB-205ENST00000432588 RGP1Q92546 391 aaPredicted RBP12.8□□□□□ -0.36
ACTB-205ENST00000432588 NBEAL2Q6ZNJ1 2754 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 TRAV39A0A0B4J263 110 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 NCBP2LA6PVI3 153 aaKnown RBP12.79□□□□□ -0.36
ACTB-205ENST00000432588 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
ACTB-205ENST00000432588 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 MYCNOSP40205 109 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 MPV17LQ2QL34 196 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 KLHL30-AS1Q8NEE0 82 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 NEK7Q8TDX7 302 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 FGF20Q9NP95 211 aaPredicted RBP12.79□□□□□ -0.36
ACTB-205ENST00000432588 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.36
ACTB-205ENST00000432588 LINC00527Q9UJ94 153 aa12.79□□□□□ -0.36
ACTB-205ENST00000432588 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 A0A1W2PPE3 182 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 IRGMA1A4Y4 181 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 AP4M1O00189 453 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 SDCBPO00560 298 aaPredicted RBP12.78□□□□□ -0.36
ACTB-205ENST00000432588 GEMIN2O14893 280 aaKnown RBP12.78□□□□□ -0.36
ACTB-205ENST00000432588 SERPINA2P20848 420 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 IL3RAP26951 378 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 DCKP27707 260 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 BDKRB2P30411 391 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 REG1BP48304 166 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 CD69Q07108 199 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 EBI3Q14213 229 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 ATAD3CQ5T2N8 411 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 TGIF2LXQ8IUE1 241 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 ZNF695Q8IW36 515 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 IZUMO1Q8IYV9 350 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 STPG2Q8N412 459 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 ZNF555Q8NEP9 628 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 OR2T10Q8NGZ9 312 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 APH1BQ8WW43 257 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 EAF1Q96JC9 268 aaPredicted RBP12.78□□□□□ -0.36
ACTB-205ENST00000432588 SLC29A1Q99808 456 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
ACTB-205ENST00000432588 ORC5O43913 435 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 GTF2F2P13984 249 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
ACTB-205ENST00000432588 GPR176Q14439 515 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 XAF1Q6GPH4 301 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 LINC00311Q8N616 119 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 C8orf31Q8N9H6 132 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 SMIM19Q96E16 107 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 SPACA1Q9HBV2 294 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 RAB9BQ9NP90 201 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 LIN7CQ9NUP9 197 aaKnown RBP12.77□□□□□ -0.37
ACTB-205ENST00000432588 ZNF581Q9P0T4 197 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 TENM3Q9P273 2699 aa12.77□□□□□ -0.37
ACTB-205ENST00000432588 IGHV3-72A0A0B4J1Y9 119 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
ACTB-205ENST00000432588 MYL12AP19105 171 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 ETV1P50549 477 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 RIPK1Q13546 671 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 Q3ZCU0 254 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 SLC22A6Q4U2R8 563 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 OR2G6Q5TZ20 316 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 PQLC1Q8N2U9 271 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 P2RX4Q99571 388 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
ACTB-205ENST00000432588 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 GFOD1Q9NXC2 390 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
ACTB-205ENST00000432588 AIPO00170 330 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 CCL24O00175 119 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 OGG1O15527 345 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 TXNL1O43396 289 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 WBP4O75554 376 aaKnown RBP12.75□□□□□ -0.37
ACTB-205ENST00000432588 MT-ND4P03905 459 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 CD1BP29016 333 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 GPR12P47775 334 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 RAB25P57735 213 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 MED21Q13503 144 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 SMN1Q16637 294 aaKnown RBP12.75□□□□□ -0.37
ACTB-205ENST00000432588 TMEM30BQ3MIR4 351 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 CXorf66Q5JRM2 361 aaPredicted RBP12.75□□□□□ -0.37
ACTB-205ENST00000432588 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 OR8H1Q8NGG4 311 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 UBALD1Q8TB05 177 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 RTN4IP1Q8WWV3 396 aaPredicted RBP12.75□□□□□ -0.37
ACTB-205ENST00000432588 RDH12Q96NR8 316 aa12.75□□□□□ -0.37
ACTB-205ENST00000432588 B9D2Q9BPU9 175 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms