RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 DPCDQ9BVM2 203 aaPredicted RBP11.68□□□□□ -0.54
PRKDC-203ENST00000432581 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
PRKDC-203ENST00000432581 IGHV3-72A0A0B4J1Y9 119 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 A0A1W2PPE3 182 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 SAC3D1A6NKF1 404 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 SEC14L6B5MCN3 397 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 GABRPO00591 440 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 IL3RAP26951 378 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 CD1BP29016 333 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 ECI1P42126 302 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 REG1BP48304 166 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 ASCL4Q6XD76 172 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 Q8N9W7 124 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
PRKDC-203ENST00000432581 TRAV39A0A0B4J263 110 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 MOSP00540 346 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 IGHG4P01861 327 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 VDAC1P21796 283 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 RASSF2P50749 326 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 Q3ZCU0 254 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 NHLRC3Q5JS37 347 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 LHFPL3Q86UP9 236 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 OR10K1Q8NGX5 313 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
PRKDC-203ENST00000432581 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 S1PR3Q99500 378 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
PRKDC-203ENST00000432581 SDCBPO00560 298 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-203ENST00000432581 TXNL1O43396 289 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-203ENST00000432581 HTR3BO95264 441 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 ALPLP05186 524 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 OR5H8P0DN80 308 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 CHATP28329 748 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 CFHR3Q02985 330 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 FHL3Q13643 280 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 TMEM104Q8NE00 496 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 OR51A2Q8NGJ7 313 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
PRKDC-203ENST00000432581 PLSCR3Q9NRY6 295 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 GFOD1Q9NXC2 390 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 SCOCQ9UIL1 159 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 ZNF580Q9UK33 172 aa11.65□□□□□ -0.54
PRKDC-203ENST00000432581 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-203ENST00000432581 C15orf65H3BRN8 121 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 ORC5O43913 435 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 FADS2O95864 444 aaKnown RBP11.64□□□□□ -0.55
PRKDC-203ENST00000432581 CSTBP04080 98 aaKnown RBP11.64□□□□□ -0.55
PRKDC-203ENST00000432581 IGF1P05019 195 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 CD2P06729 351 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 SOX6P35712 828 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 INSL3P51460 131 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 GBX2P52951 348 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-203ENST00000432581 RBM11P57052 281 aaKnown RBP11.64□□□□□ -0.55
PRKDC-203ENST00000432581 FAM71E2Q8N5Q1 922 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 CHCHD6Q9BRQ6 235 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 JAM3Q9BX67 310 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
PRKDC-203ENST00000432581 PAK1IP1Q9NWT1 392 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-203ENST00000432581 E9PI62 339 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 PSMB8P28062 276 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF137PP52743 207 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 MPV17LQ2QL34 196 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 TMEM30BQ3MIR4 351 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 KCTD7Q96MP8 289 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 Q96MT0 163 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 S100A13Q99584 98 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ASCL2Q99929 193 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 HSPB9Q9BQS6 159 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ERVK13-1Q9NX77 482 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 TAS2R4Q9NYW5 299 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF581Q9P0T4 197 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 ING4Q9UNL4 249 aa11.63□□□□□ -0.55
PRKDC-203ENST00000432581 EI24O14681 340 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 GEMIN2O14893 280 aaKnown RBP11.62□□□□□ -0.55
PRKDC-203ENST00000432581 ZNF780AO75290 641 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-203ENST00000432581 ATP5HO75947 161 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 CDRT1O95170 752 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 SOX2P48431 317 aa11.62□□□□□ -0.55
PRKDC-203ENST00000432581 PPP3R1P63098 170 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms