RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 SERPINE3A8MV23 424 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 HSD17B6O14756 317 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 ZNF780AO75290 641 aaPredicted RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 GPX5O75715 221 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 IGHG2P01859 326 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 GAPDHP04406 335 aaKnown RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 IGFBP3P17936 291 aaPredicted RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 RPL23AP62750 156 aaKnown RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 ZNF816Q0VGE8 651 aaPredicted RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 ETV3LQ6ZN32 361 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 MOB3BQ86TA1 216 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 LINC00596Q86U02 117 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 LINC00311Q8N616 119 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 GHSRQ92847 366 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 SMIM19Q96E16 107 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 SMPD3Q9NY59 655 aaPredicted RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 COL7A1Q02388 2944 aa12.78□□□□□ -0.36
AC055876.3-201ENST00000431496 IGHV1-3A0A0C4DH29 117 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 TRBV5-5A0A0J9YX44 114 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 IRGMA1A4Y4 181 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 CCRL2O00421 344 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 ORC5O43913 435 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 BAG2O95816 211 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 LALBAP00709 142 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 MT-ND4P03905 459 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 GTF2F2P13984 249 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 SERPINA2P20848 420 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 THBS3P49746 956 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 EGFEM1PQ0D2K5 195 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 RIPK1Q13546 671 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 MPV17LQ2QL34 196 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 DMKNQ6E0U4 476 aaPredicted RBP12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 OR2W3Q7Z3T1 314 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 C8orf31Q8N9H6 132 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 OR51D1Q8NGF3 324 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 CCDC107Q8WV48 283 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 EAF1Q96JC9 268 aaPredicted RBP12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 ZNF184Q99676 751 aaPredicted RBP12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 ZFP57Q9NU63 452 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 TENM3Q9P273 2699 aa12.77□□□□□ -0.37
AC055876.3-201ENST00000431496 A0A1W2PP11 408 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 MYL12AP19105 171 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 SLC6A1P30531 599 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 REG1BP48304 166 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 RPS11P62280 158 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 DEFB121Q5J5C9 76 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 COMMD1Q8N668 190 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 ST6GALNAC6Q969X2 333 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 GFOD1Q9NXC2 390 aa12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 EXOSC1Q9Y3B2 195 aaKnown RBP12.76□□□□□ -0.37
AC055876.3-201ENST00000431496 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 NCBP2LA6PVI3 153 aaKnown RBP12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 SLC35B1P78383 322 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 GPR176Q14439 515 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 Q499Y3 187 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 FAM53AQ6NSI3 398 aaPredicted RBP12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 TGIF2LXQ8IUE1 241 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 STPG2Q8N412 459 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 Q8N6K4 173 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 ZNF485Q8NCK3 441 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 OR2T10Q8NGZ9 312 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 GPR61Q9BZJ8 451 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 CKLFQ9UBR5 152 aa12.75□□□□□ -0.37
AC055876.3-201ENST00000431496 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 IGHV3-43A0A0B4J1X8 118 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 IGHV3-43DP0DP04 118 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 CD1BP29016 333 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 MYCNOSP40205 109 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 Q3ZCU0 254 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 STX19Q8N4C7 294 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 MRPS24Q96EL2 167 aaKnown RBP12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 ABCG5Q9H222 651 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 SPACA1Q9HBV2 294 aa12.74□□□□□ -0.37
AC055876.3-201ENST00000431496 PLSCR3Q9NRY6 295 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms