RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 RAB12Q6IQ22 244 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 Q6ZSV7 163 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 TCF23Q7RTU1 214 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 FAM89BQ8N5H3 189 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 OR4F5Q8NH21 305 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 LGALS14Q8TCE9 139 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 BARHL1Q9BZE3 327 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 BEX1Q9HBH7 125 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 ING3Q9NXR8 418 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 RAB22AQ9UL26 194 aa13.76□□□□□ -0.21
UBE3D-204ENST00000430071 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-204ENST00000430071 CLPSL1A2RUU4 121 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 SOCS1O15524 211 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 PDCD6O75340 191 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 FUT3P21217 361 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 CHATP28329 748 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 ERP29P30040 261 aaKnown RBP13.75□□□□□ -0.21
UBE3D-204ENST00000430071 RANBP1P43487 201 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 TMBIM6P55061 237 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 ZNF782Q6ZMW2 699 aaPredicted RBP13.75□□□□□ -0.21
UBE3D-204ENST00000430071 SLC25A46Q96AG3 418 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 URM1Q9BTM9 101 aaKnown RBP13.75□□□□□ -0.21
UBE3D-204ENST00000430071 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 SPACA1Q9HBV2 294 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 PEX16Q9Y5Y5 336 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 CEPT1Q9Y6K0 416 aa13.75□□□□□ -0.21
UBE3D-204ENST00000430071 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-204ENST00000430071 RAB6AP20340 208 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 COX7A1P24310 79 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 MEF2CQ06413 473 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-204ENST00000430071 BLMHQ13867 455 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 SPCS2Q15005 226 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 LDLRAD2Q5SZI1 272 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 RSBN1Q5VWQ0 802 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-204ENST00000430071 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 LHFPL4Q7Z7J7 247 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 DYNAPQ8N1N2 210 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 OR5H6Q8NGV6 325 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 RAB2BQ8WUD1 216 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 DPAGT1Q9H3H5 408 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 RNF114Q9Y508 228 aa13.74□□□□□ -0.21
UBE3D-204ENST00000430071 ODAMA1E959 279 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 H3BUX3 64 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 BLVRBP30043 206 aaPredicted RBP13.73□□□□□ -0.21
UBE3D-204ENST00000430071 KCNJ3P48549 501 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 VEGFCP49767 419 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 TMEM50BP56557 158 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 PROK1P58294 105 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 PAX5Q02548 391 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 LY6EQ16553 131 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 NKAPLQ5M9Q1 402 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 HIST2H2BDQ6DRA6 164 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 PTX4Q96A99 478 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 ISOC1Q96CN7 298 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 CITED1Q99966 193 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 RBM38Q9H0Z9 239 aaKnown RBP13.73□□□□□ -0.21
UBE3D-204ENST00000430071 KIF25Q9UIL4 384 aa13.73□□□□□ -0.21
UBE3D-204ENST00000430071 hADV38S2A0JD32 116 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 UBE2QL1A1L167 161 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 MCRIP1C9JLW8 97 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 H3BMQ9 156 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 WIPF1O43516 503 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 MOGAT2Q3SYC2 334 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 CROCCP3Q8IVE0 287 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 SLC25A38Q96DW6 304 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 SSX3Q99909 188 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 SULT4A1Q9BR01 284 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 SIGLEC9Q9Y336 463 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 LINC00312Q9Y6C7 94 aa13.72□□□□□ -0.21
UBE3D-204ENST00000430071 MEIKINA0A087WXM9 373 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 A0A1B0GUS0 222 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 C17orf98A8MV24 154 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 KCNAB3O43448 404 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 TMEM127O75204 238 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 GLAP06280 429 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 SCAND1P57086 179 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 RBM39Q14498 530 aaKnown RBP13.71□□□□□ -0.21
UBE3D-204ENST00000430071 PLAC9Q5JTB6 97 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 SLC35E4Q6ICL7 350 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 ZNF497Q6ZNH5 498 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 OR56B1Q8NGI3 324 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 PIFOQ8TCI5 191 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 FAAP24Q9BTP7 215 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 ETAA1Q9NY74 926 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 ABRACLQ9P1F3 81 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 ETV7Q9Y603 341 aa13.71□□□□□ -0.21
UBE3D-204ENST00000430071 TRAV39A0A0B4J263 110 aa13.71□□□□□ -0.22
UBE3D-204ENST00000430071 TMEM30CPA0ZSE6 113 aa13.71□□□□□ -0.22
UBE3D-204ENST00000430071 H3BUI4 141 aa13.71□□□□□ -0.22
UBE3D-204ENST00000430071 RAB27BO00194 218 aa13.71□□□□□ -0.22
UBE3D-204ENST00000430071 MT-ND4P03905 459 aa13.71□□□□□ -0.22
UBE3D-204ENST00000430071 ZNF728P0DKX0 622 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms