RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 DEDDO75618 318 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 IGHV3-9P01782 118 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 IGHMP01871 453 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 IFNA6P05013 189 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 CST2P09228 141 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 NTF4P34130 210 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 IDH3GP51553 393 aaPredicted RBP9.83□□□□□ -0.84
CECR3-201ENST00000428828 TMEM33P57088 247 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 FOXF2Q12947 444 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 EIF2B1Q14232 305 aaKnown RBP9.83□□□□□ -0.84
CECR3-201ENST00000428828 KCNMB1Q16558 191 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 C1orf100Q5SVJ3 147 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 DMRTA1Q5VZB9 504 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 ZNF343Q6P1L6 599 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 CLEC18BQ6UXF7 455 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 AAED1Q7RTV5 226 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 NUFIP2Q7Z417 695 aaKnown RBP9.83□□□□□ -0.84
CECR3-201ENST00000428828 CDC20BQ86Y33 519 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 NKAIN3Q8N8D7 197 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 ZIC4Q8N9L1 334 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 ZNF519Q8TB69 540 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 GMPPAQ96IJ6 420 aaPredicted RBP9.83□□□□□ -0.84
CECR3-201ENST00000428828 C4orf45Q96LM5 186 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 URM1Q9BTM9 101 aaKnown RBP9.83□□□□□ -0.84
CECR3-201ENST00000428828 SRD5A3Q9H8P0 318 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 KIAA1456Q9P272 454 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 ZFP30Q9Y2G7 519 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 TMEM14AQ9Y6G1 99 aa9.83□□□□□ -0.84
CECR3-201ENST00000428828 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 LOC102725191A0A1B0GVB3 256 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 MBD3L4A6NDZ8 208 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 MBD3L3A6NE82 208 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 MBD3L5A6NJ08 208 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 K7N7A8 449 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 MRPL33O75394 65 aaKnown RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 OPN1MWP04001 364 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 SRP19P09132 144 aaKnown RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 OPN1MW2P0DN77 364 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 OPN1MW3P0DN78 364 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 GLI4P10075 376 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 GNLYP22749 145 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 FPR2P25090 351 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 CDKN2AP42771 156 aaKnown RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 CLRN1P58418 232 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 FMODQ06828 376 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 GPR157Q5UAW9 335 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 SP5Q6BEB4 398 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 MBD3L2Q8NHZ7 208 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 ASB5Q8WWX0 329 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 TMEM230Q96A57 120 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 TMEM18Q96B42 140 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 CTDSP1Q9GZU7 261 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 LPAR2Q9HBW0 351 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ZNF727A8MUV8 499 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 CLDN34H7C241 214 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 CCL21O00585 134 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 IGHG1P01857 330 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 RAC2P15153 192 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 IGFBP3P17936 291 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 CA7P43166 264 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 VWA1Q6PCB0 445 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 TRAPPC6BQ86SZ2 158 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ZNF429Q86V71 674 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ZNF100Q8IYN0 542 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ZNF679Q8IYX0 411 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 BHLHE23Q8NDY6 225 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 OR4S1Q8NGB4 309 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 MRGPRDQ8TDS7 321 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ALKBH3Q96Q83 286 aaPredicted RBP9.82□□□□□ -0.84
CECR3-201ENST00000428828 INTS14Q96SY0 518 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 ALG12Q9BV10 488 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 CKLFQ9UBR5 152 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 RAB22AQ9UL26 194 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 EMC9Q9Y3B6 208 aa9.82□□□□□ -0.84
CECR3-201ENST00000428828 DIDO1Q9BTC0 2240 aaKnown RBP9.81□□□□□ -0.84
CECR3-201ENST00000428828 POLEQ07864 2286 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 A6NIZ1 184 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 ZNF705GA8MUZ8 300 aaPredicted RBP9.81□□□□□ -0.84
CECR3-201ENST00000428828 SS18L1O75177 396 aaPredicted RBP9.81□□□□□ -0.84
CECR3-201ENST00000428828 TXNDC12O95881 172 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 PGA4P0DJD7 388 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 PGA3P0DJD8 388 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 PGA5P0DJD9 388 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 BRS3P32247 399 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 ZNF506Q5JVG8 444 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 TGIF2LYQ8IUE0 185 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 FOXRED2Q8IWF2 684 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 OR51L1Q8NGJ5 315 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 ZNRF4Q8WWF5 429 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 SLC25A44Q96H78 314 aaPredicted RBP9.81□□□□□ -0.84
CECR3-201ENST00000428828 SNX22Q96L94 193 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 ADAD1Q96M93 576 aaKnown RBP9.81□□□□□ -0.84
CECR3-201ENST00000428828 FOXN4Q96NZ1 517 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 TSSK2Q96PF2 358 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms