RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR8U8P0C7N1 319 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 PSMB8P28062 276 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 CD1BP29016 333 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 SOX6P35712 828 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 PAX5Q02548 391 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 DOC2BQ14184 412 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 TMEM104Q8NE00 496 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 UBALD1Q8TB05 177 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 TNFAIP8L1Q8WVP5 186 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 RTN4IP1Q8WWV3 396 aaPredicted RBP14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 PELI1Q96FA3 418 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 KCTD7Q96MP8 289 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 GPER1Q99527 375 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 DPCDQ9BVM2 203 aaPredicted RBP14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 CSMD3Q7Z407 3707 aa14.27□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF736B4DX44 427 aaPredicted RBP14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 SDCBPO00560 298 aaPredicted RBP14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 IL3RAP26951 378 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 ALKBH1Q13686 389 aaKnown RBP14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 RSU1Q15404 277 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 SATL1Q86VE3 508 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 SERPINA12Q8IW75 414 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 SUMF2Q8NBJ7 301 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 PXT1Q8NFP0 134 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR8H1Q8NGG4 311 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR1N2Q8NGR9 330 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 ARL11Q969Q4 196 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 RNFT2Q96EX2 444 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 C4orf36Q96KX1 117 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR5B12Q96R08 314 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 FAM192AQ9GZU8 254 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 ISYNA1Q9NPH2 558 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF581Q9P0T4 197 aa14.26□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 GZMHP20718 246 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 F2RL1P55085 397 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF616Q08AN1 781 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 FAM53AQ6NSI3 398 aaPredicted RBP14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 TMEM65Q6PI78 240 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 AMIGO2Q86SJ2 522 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 FAM71E2Q8N5Q1 922 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 LINC00311Q8N616 119 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 RBMXL1Q96E39 390 aaKnown RBP14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 CPNE2Q96FN4 548 aaPredicted RBP14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 GABARAPL3Q9BY60 117 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZMAT4Q9H898 229 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 GNB4Q9HAV0 340 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
UPK3BP1-201ENST00000428678 IGHV3-43A0A0B4J1X8 118 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 TMEM30CPA0ZSE6 113 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 J3QRE1 110 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 GABRPO00591 440 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 MAGEB3O15480 346 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 HTR3BO95264 441 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 IGF1P05019 195 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 FRMD6-AS1P0C7T7 363 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 IGHV3-43DP0DP04 118 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 SLC2A2P11168 524 aaPredicted RBP14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 FASP25445 335 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 ASPHD1Q5U4P2 390 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZFAND6Q6FIF0 208 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF429Q86V71 674 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 PARP16Q8N5Y8 322 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR52M1Q8NGK5 317 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 MYOZ3Q8TDC0 251 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 CCDC107Q8WV48 283 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 TSEN15Q8WW01 171 aaKnown RBP14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 ST6GALNAC6Q969X2 333 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 UBE2E2Q96LR5 201 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 KLK15Q9H2R5 256 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 GFOD1Q9NXC2 390 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 DHDHQ9UQ10 334 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 VSIG4Q9Y279 399 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 STARD9Q9P2P6 4700 aa14.24□□□□□ -0.13
UPK3BP1-201ENST00000428678 C15orf65H3BRN8 121 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 I3L521 148 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 SAP30O75446 220 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR7C1O76099 320 aaPredicted RBP14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 RAB3AP20336 220 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 MYF6P23409 242 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 GNB1P62873 340 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 ACBD7Q8N6N7 88 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 C8orf31Q8N9H6 132 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 MRPL48Q96GC5 212 aaKnown RBP14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 ST3GAL6Q9Y274 331 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 WSB1Q9Y6I7 421 aa14.23□□□□□ -0.13
UPK3BP1-201ENST00000428678 DNAH1Q9P2D7 4330 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 OVOL1O14753 267 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 SLC31A2O15432 143 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 TXNL1O43396 289 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 SPNP16150 400 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 RUNX1Q01196 453 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF491Q8N8L2 437 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR51A2Q8NGJ7 313 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 DCUN1D4Q92564 292 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 ZNF580Q9UK33 172 aa14.22□□□□□ -0.13
UPK3BP1-201ENST00000428678 TMEM212A6NML5 194 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 CDRT1O95170 752 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 RPSAP08865 295 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms