RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CCL4P13236 92 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 LGALSLQ3ZCW2 172 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-208ENST00000428599 DCAF10Q5QP82 559 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 TEX261Q6UWH6 196 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 STPG3Q8N7X2 389 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 LSMEM1Q8N8F7 131 aa7.86□□□□□ -1.15
CTNND1-208ENST00000428599 J3QT63 122 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 FXYD1O00168 92 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 INHBBP09529 407 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 DAOP14920 347 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 RPS4Y2Q8TD47 263 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 ANAPC16Q96DE5 110 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 WDR34Q96EX3 536 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 NAT8Q9UHE5 227 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 WDR90Q96KV7 1748 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 IGHV3OR15-7A0A075B7D8 119 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 A0A1B0GTH9 108 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 SYNGR1O43759 233 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 HIST3H3Q16695 136 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 STPG1Q5TH74 334 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 C12orf73Q69YU5 71 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 ZNF770Q6IQ21 691 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-208ENST00000428599 LRP11Q86VZ4 500 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 CALHM1Q8IU99 346 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 ZBTB34Q8NCN2 500 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 OR52M1Q8NGK5 317 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 GDF15Q99988 308 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 OR2H1Q9GZK4 316 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 PLAC1Q9HBJ0 212 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 PRR35P0CG20 571 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 FGF8P55075 233 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-208ENST00000428599 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 RIMKLAQ8IXN7 391 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 GBGT1Q8N5D6 347 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 SLC35B3Q9H1N7 401 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 PITPNC1Q9UKF7 332 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 IFNL4K9M1U5 179 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 FBXW9Q5XUX1 488 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 RNF165Q6ZSG1 346 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 OR8B12Q8NGG6 310 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 HMGCLL1Q8TB92 370 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 RAB37Q96AX2 223 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 DCTN5Q9BTE1 182 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 DUSP21Q9H596 190 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 CNTD2Q9H8S5 307 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 GPR35Q9HC97 309 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 Q9N2K0 584 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 SLC6A13Q9NSD5 602 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 BET1LQ9NYM9 111 aa7.85□□□□□ -1.15
CTNND1-208ENST00000428599 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
CTNND1-208ENST00000428599 ALX3O95076 343 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 GAPDHP04406 335 aaKnown RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 CTSDP07339 412 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 HIKESHIQ53FT3 197 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 ZNF714Q96N38 554 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 CHST1O43916 411 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 ZNF735P0CB33 412 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 APELAP0DMC3 54 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 DYNLT3P51808 116 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 RPL31P62899 125 aaKnown RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 RAB32Q13637 225 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 FAM106AQ4KMX7 169 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 TEX30Q5JUR7 227 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 WDR25Q64LD2 544 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 C16orf47Q6ZP98 133 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 OR10G8Q8NGN5 311 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 NXF2Q9GZY0 626 aaKnown RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 TMEM140Q9NV12 185 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 IGHV5-10-1A0A0J9YXX1 117 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 C11orf94C9JXX5 98 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 CTAG2O75638 210 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 ADRA2AP08913 450 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 PPP1R1AQ13522 171 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 Q6ZNX1 250 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 PTX4Q96A99 478 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 ATG101Q9BSB4 218 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 LPAR5Q9H1C0 372 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 MRPS16Q9Y3D3 137 aaKnown RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 OR51B2Q9Y5P1 312 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 A0A1W2PPC1 479 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 LIPT2A6NK58 231 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 ISLRO14498 428 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 CA11O75493 328 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 IGHV4-34P06331 123 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 MAS1LP35410 378 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 HERPUD1Q15011 391 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 KIAA0040Q15053 153 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 GABRA6Q16445 453 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 HLA-DRB5Q30154 266 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 FAM53AQ6NSI3 398 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-208ENST00000428599 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 OR2J1Q9GZK6 312 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 CROCCQ5TZA2 2017 aa7.84□□□□□ -1.15
CTNND1-208ENST00000428599 TUBGCP6Q96RT7 1819 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms